PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g519740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GATA

Protein Properties

Length: 678aa MW: 73497.2 Da PI: 6.3851

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g519740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	54	2.3e-17	267	301	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l Pd.00g519740.m01 267 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 301 99*****************************9885 PP
2	GATA	54	2.3e-17	606	640	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l Pd.00g519740.m01 606 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 640 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MEAPEYFQNS FCPQFTPEKR HSFDNNNNKA TNGGGGGGDH FMVEDLLDFS NDDAVITDGG 60 ATFDNVTGNS TDSSTLTVID SCNSSSLSGS EPNVIPDIGS RNIAEGPFSS DLCVPYDDLA 120 ELEWLSNFVE ESFSSQDLQK LQLISGMKAR PDEAASETRQ FQPERNRNDN AHNTTTTTNN 180 NPIFNPDVSV PAKARSKRSR AAPCNWTSRL LLLSQPTSSS EQSDVVSSGP ASPSPPPSTG 240 KKTVKSAPKK KESPEGPGGG PGDGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR 300 LVPEYRPASS PTFVLTKHSN SHRKVLELRR QKEMRILPEL VAMEAPEYFQ NSFCPQFTPE 360 KRHSFDNNNN KATNGGGGGG DHFMVEDLLD FSNDDAVITD GGATFDNVTG NSTDSSTLTV 420 IDSCNSSSLS GSEPNVIPDI GSRNIAEGPF SSDLCVPYDD LAELEWLSNF VEESFSSEDL 480 QKLQLISGMK ARPDEAASET RQFQPERNRN DNAHNTNNNP IFNPDVSVPA KARSKRSRAA 540 PCNWTSRLLL LSQPTSSSEQ SDVVSSGPAS PLPPPSTTGK KTVKSAPKKK ESPEGPGGGP 600 GEGRKCLHCA TDKTPQWRTG PMGPKTLCNA CGVRYKSGRL VPEYRPASSP TFVLTKHSNS 660 HRKVLELRRQ KEMDPRQC

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MEAPEYFQNS FCPQFTPEKR HSFDNNNNKA TNGGGGGGDH FMVEDLLDFS NDDAVITDGG  60
ATFDNVTGNS TDSSTLTVID SCNSSSLSGS EPNVIPDIGS RNIAEGPFSS DLCVPYDDLA  120
ELEWLSNFVE ESFSSQDLQK LQLISGMKAR PDEAASETRQ FQPERNRNDN AHNTTTTTNN  180
NPIFNPDVSV PAKARSKRSR AAPCNWTSRL LLLSQPTSSS EQSDVVSSGP ASPSPPPSTG  240
KKTVKSAPKK KESPEGPGGG PGDGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR  300
LVPEYRPASS PTFVLTKHSN SHRKVLELRR QKEMRILPEL VAMEAPEYFQ NSFCPQFTPE  360
KRHSFDNNNN KATNGGGGGG DHFMVEDLLD FSNDDAVITD GGATFDNVTG NSTDSSTLTV  420
IDSCNSSSLS GSEPNVIPDI GSRNIAEGPF SSDLCVPYDD LAELEWLSNF VEESFSSEDL  480
QKLQLISGMK ARPDEAASET RQFQPERNRN DNAHNTNNNP IFNPDVSVPA KARSKRSRAA  540
PCNWTSRLLL LSQPTSSSEQ SDVVSSGPAS PLPPPSTTGK KTVKSAPKKK ESPEGPGGGP  600
GEGRKCLHCA TDKTPQWRTG PMGPKTLCNA CGVRYKSGRL VPEYRPASSP TFVLTKHSNS  660
HRKVLELRRQ KEMDPRQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	3e-68	GATA family protein