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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g517040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HB-other | ||||||||
Protein Properties | Length: 297aa MW: 33511.5 Da PI: 8.0721 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.2 | 6.5e-09 | 231 | 278 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k +e+Le++++k++ p+ +++ + + ++L+ ++V WF +R Pd.00g517040.m01 231 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRS 278 5778899*************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MAFASALNTP KGLHCLTLPS SSNERPPTNL ILPRQFPARF SSTLALARRR NQRTEVASSK 60 PKINKKILAK KEVKDEEEED VDEDAIDALF RLLEEDLKND DASLDDEDLT EEELAKLEQE 120 LKTWQLRRLA AALKVGRRKT SIKILAAELC LDRPVVLELL RNPPPSLLMM CAALPDEPAP 180 TISVSQTMPV ETVVETTVET VVETTTESSE VETTVNKPIH VMQQKFSAQK RLKKAHVETL 240 ESVYRKTKRP TNAMISSIVH VTNLPRKRVV KWFEDKRSED GVTDSRLPYR RPAPNTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 8e-63 | HB-other family protein |