PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g511590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 494aa MW: 56584.7 Da PI: 5.8197

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g511590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.1	5.1e-07	401	438	2	39
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 +Y++YA GFs+rk+ +ks+ ng +++r+++C+ e Pd.00g511590.m01 401 CYSRYAVLEGFSIRKDFLNKSRINGIVVSRRYTCQLEF 438 7*********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MKSEGRQHGM FRPYRVLPDP LNLRPGNRQV NKFDSLSTAG LFTKVATKPT NHSKFTGKCG 60 KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHLLPAAL CLIDHNIRNI WFVEIPLEHP 120 RALHPQSSRI FPRFPKVEWV VVSLIYQVIH KKSDYNELPM SFRLDIDVHP QEESDYNELP 180 TSFRLDIDVQ RDCRSSKDSS DFFVFPSFFS SLPNEGGWVV VSLIYQVIHK KSDYNELPTS 240 FRLDIDVHPQ EESDYNELPT SFRLDIDVQR DCQSSKDSSA ERSQAVIDHE HDSPRECQSP 300 KGSSFEKRQV VIDTEQECQS PIPSSIDKNQ VEIDCEECET PKFYSLSKFE MDVDGELELQ 360 SPNVPCADVP GAGMAMKGEE YIYVVPQVGV EFESEDHLYN CYSRYAVLEG FSIRKDFLNK 420 SRINGIVVSR RYTCQLEFPE EKLDSSFCDS HQIYSPGHGG KLCTNGCAIY RSRFLGELLW 480 TYREDTAVLD IYIL

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MKSEGRQHGM FRPYRVLPDP LNLRPGNRQV NKFDSLSTAG LFTKVATKPT NHSKFTGKCG  60
KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHLLPAAL CLIDHNIRNI WFVEIPLEHP  120
RALHPQSSRI FPRFPKVEWV VVSLIYQVIH KKSDYNELPM SFRLDIDVHP QEESDYNELP  180
TSFRLDIDVQ RDCRSSKDSS DFFVFPSFFS SLPNEGGWVV VSLIYQVIHK KSDYNELPTS  240
FRLDIDVHPQ EESDYNELPT SFRLDIDVQR DCQSSKDSSA ERSQAVIDHE HDSPRECQSP  300
KGSSFEKRQV VIDTEQECQS PIPSSIDKNQ VEIDCEECET PKFYSLSKFE MDVDGELELQ  360
SPNVPCADVP GAGMAMKGEE YIYVVPQVGV EFESEDHLYN CYSRYAVLEG FSIRKDFLNK  420
SRINGIVVSR RYTCQLEFPE EKLDSSFCDS HQIYSPGHGG KLCTNGCAIY RSRFLGELLW  480
TYREDTAVLD IYIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-06	FAR1 family protein