PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g511570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 443aa MW: 50733.9 Da PI: 6.6463

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g511570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	4.8e-23	164	250	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFs+rk+ +ks+ ng +++r+++C+++g+r ++++ + r++r+etrtgC a++++ ++ +gk++vt++e +HnHe++ Pd.00g511570.m01 164 CYSRYAVLEGFSIRKDFVNKSRINGIVVSRRYTCYRQGYRPIQHNA--NVRKSRQETRTGCLAHMTIARQPNGKFCVTHFEPKHNHEFV 250 7***************************************9988..9999********************************986 PP
2	FAR1	92.8	4.2e-29	298	386	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk ng++++r+f+C +eg+r+++k++ + +r+r+etr+gC a+l+++++ d++++vt++e++HnHel+ Pd.00g511570.m01 298 EFYNTYAGRVGFSVRKDYVNRSKINGSVVSRRFTCFREGFRQRDKRD-MNVKRPRKETRIGCLAQLVISRQPDDRYRVTHFEEKHNHELV 386 6*****************************************999.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGCSEPDISS HPQEESDYNE LPTSFRLDID VQRDCRSSKD SCAERSQAVI DHEHDSPREC 60 QSPKGSSFEK RLVVIDTEQE YQSPIPSSID KNQVDIDCEE CETPKFYSVS KFEMDVDGEL 120 ELQSPNVPCA DVPGAGMAMK GEEYIYVVPQ IGVEFESEDH AYNCYSRYAV LEGFSIRKDF 180 VNKSRINGIV VSRRYTCYRQ GYRPIQHNAN VRKSRQETRT GCLAHMTIAR QPNGKFCVTH 240 FEPKHNHEFV APCTTYLLPS QKRLNFAQAV EADLGDKSGI DGMPKLGMGF DSEDHAYEFY 300 NTYAGRVGFS VRKDYVNRSK INGSVVSRRF TCFREGFRQR DKRDMNVKRP RKETRIGCLA 360 QLVISRQPDD RYRVTHFEEK HNHELVAACR VHMLRSQKRL IAAQVFEGDL VDCSNMQPES 420 ASELIPDHSI LYHHPEARGT LKL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGCSEPDISS HPQEESDYNE LPTSFRLDID VQRDCRSSKD SCAERSQAVI DHEHDSPREC  60
QSPKGSSFEK RLVVIDTEQE YQSPIPSSID KNQVDIDCEE CETPKFYSVS KFEMDVDGEL  120
ELQSPNVPCA DVPGAGMAMK GEEYIYVVPQ IGVEFESEDH AYNCYSRYAV LEGFSIRKDF  180
VNKSRINGIV VSRRYTCYRQ GYRPIQHNAN VRKSRQETRT GCLAHMTIAR QPNGKFCVTH  240
FEPKHNHEFV APCTTYLLPS QKRLNFAQAV EADLGDKSGI DGMPKLGMGF DSEDHAYEFY  300
NTYAGRVGFS VRKDYVNRSK INGSVVSRRF TCFREGFRQR DKRDMNVKRP RKETRIGCLA  360
QLVISRQPDD RYRVTHFEEK HNHELVAACR VHMLRSQKRL IAAQVFEGDL VDCSNMQPES  420
ASELIPDHSI LYHHPEARGT LKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-29	FAR1 family protein