PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g510720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 277aa MW: 31024.2 Da PI: 9.1948 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 127.2 | 6.4e-40 | 3 | 79 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C vegC++dls ++eyhrrh+vCe hsk+pvv+v+g+++rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+++ Pd.00g510720.m01 3 CLVEGCKTDLSLCREYHRRHRVCELHSKTPVVTVRGEQKRFCQQCSRFHSLVEFDEVKRSCRKRLNGHNQRRRKPKP 79 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MSCLVEGCKT DLSLCREYHR RHRVCELHSK TPVVTVRGEQ KRFCQQCSRF HSLVEFDEVK 60 RSCRKRLNGH NQRRRKPKPE SLYFTSNFLS GYKGPRILQF SNPQLCATNN VRSMWPVEAK 120 KGAESMLYSR HPSFNGGDKP FLFLQTNNDP KAASGNRAAP QTFLRQQPFQ TTAASPAESR 180 KGGHIMSSDG MTRVIDSGCA LYLLSSHPAQ ASVTQSNVTT THPGQLLDSR LQMNGSFAEF 240 SCSHDAEDKA ANTEMMFLMG PDGFLDNGAQ MLPILLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 3e-47 | SBP family protein |