PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g510560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 618aa    MW: 68598.6 Da    PI: 5.8256
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g510560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS436.52e-1332546171373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g510560.m01 254 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 346
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g510560.m01 347 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 434
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g510560.m01 435 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 521
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+ +e+ GFk+v+ls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+++++
  Pd.00g510560.m01 522 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRKVMESKGFKSVALSANAVTQSKILLGLYSCDGYRMTEDKGCLLLGWQDRSIMAA 614
                       ********************************************************************************************* PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g510560.m01 615 SSW 617
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MSISMSESKK TTTPPSSEME QSSLTPPSLN FPTLKFELDG DVEVQSPDHS IWESLLFSEQ  60
FDTDFMVLSP VPNNMLDSPQ PGASLSAAHN NYNYYNYAQS MQGQSLSGCS PPRFSPHLGA  120
FSSTHNPKGK GLSPLRRVFN SPVNQYMQPA DQNMQSMPPA SIEDFLDDYQ RDSFIAAYQN  180
PTTTTTTTSS SKMSGTSSQS YNPHDMPTSS TVPAAPLDCL PMQNSSRFSR SNLNYMAPNL  240
PMAPEQEQDS GLQLVHLLLA CAEAVAKEDF MLARRYLHHL NRVVTPLGDS MQRVASCFTE  300
ALSARLTATL TTNPAASAPK PFSPFPPNSL EILKIYQIVY QACPYIKFAH FTANQAIFEA  360
FESEERVHVI DLDILQGYQW PAFMQALAAR PGGAPFLRIT GVGPCIEAVK ETGRCLTELA  420
LSLHVPFEFH AVGEQLEDLK PHMFNRRIGE ALAVNTVNRL HRVPGNYLGN VLAMIRDQAP  480
NIVTLVEQEA SHNGPYFLGR FLEALHYYSA IFDSLDATFP PDSAQRAKVE QYIFAPEIRN  540
IVACEGAERT ERHERLEKWR KVMESKGFKS VALSANAVTQ SKILLGLYSC DGYRMTEDKG  600
CLLLGWQDRS IMAASSWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-95GRAS family protein