PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g509480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 351aa MW: 39539 Da PI: 4.8324 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.8 | 7.2e-22 | 10 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 +GfrFhPtd+el++++L kk+ +k+ + ++++++++ + ++ePw + ++++yfFs+ ++ +++g+r +r + + g+W++ Pd.00g509480.m01 10 VGFRFHPTDQELISYFLYKKTVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPKGSRIKRkIEAGGTWSEAF 102 7*******************887776765556679999725689***9964233223356799******************5555899**998 PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k +++g+ +g kk L + + + ++ +W+++ey+l Pd.00g509480.m01 103 SKKVYDETTGNPIGRKKNLRYEN--EGCEHHGKWLLEEYSL 141 865555559999********983..4444589*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MTNYSGNRLV GFRFHPTDQE LISYFLYKKT VAKEPLMASY SNIVHDFNLL GETEPWVVWD 60 IFGGPDLIDE DLYFFSELKN LSPKGSRIKR KIEAGGTWSE AFSKKVYDET TGNPIGRKKN 120 LRYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSTQE LKEKPSNKKA 180 RKGLGSPRIK IEDEEPHRTS GLSSVYNNLD QELIIDTNYN AISNNICGDN QHNMLMTSDF 240 ASDPVCFDYG GLTDEEYVFD VNELLASVEP QPLSLELPQM AETLEPLLSS GLGDDRAVEA 300 WNSSGYSVLS LLSPGSRRQS GCEWQDAAPN GNRGSDSRSC ARDHGGGVGY D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-14 | NAC family protein |