PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g507210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 972aa MW: 108172 Da PI: 8.926

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g507210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.3	1.9e-06	65	121	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ l+ ++++F + +s++e +eL++ g+t +qV+ +F +R + +k Pd.00g507210.m01 65 KRPRDLLNPKALKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK 121 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
MEDLSEMEIG SSVESFHKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS 60 VKIGKRPRDL LNPKALKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR 120 KLVQLSREKA TRSSEHKELQ DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS 180 GLDDLDKHFV DNIFNLMRKE ETFSGQVKLM EWILQIQNSS VLCWFLNTDG VMILATWLSQ 240 AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSN RARVLLSRWS 300 KLLARIQNMK KPNGMKTSSD SQHDIDEVMG DESWKSNIDI PEDIFATPFE NAENSRRSEA 360 SEPLKLLTAS SDESNKKQIL GVSSSQFRAR RKVQLVEQPG QKSAGRSVQV TRATPVSKGR 420 PMSADDIQKA KMRAQFMQSK YGKSGSSNEN KELKTEGGNK LSTSQASILP VVPKVPVRPD 480 IEEPKKPVTL LLKERETPNR VETSLAPKLR MDLKESILEK CQRIRVLWKT PPEIKLDPEW 540 RVGGGENGKE IEVQRNRNRR EKETIYQRVQ EIPSNPKEPW DIEMDYDDSL TPEIPIEQPP 600 DADGTETQAS LSREGNNAQA WVTSSQGVNS AASLAPALSQ MNGASAAAEP DLELLAVLLK 660 NPELVFALTS GQAANLSSED TVKLLDMIKS GGAGNLNGLG RKMEQRVEVS LPSPTPSSNP 720 GTSGWRADAG RNAFPQQMAT TNNSLLSSAV HMIPSQRLST SQPAVPSYSP DYFPPSMQTP 780 AASEMVLTMK NTHLNNLSNS YNVAERQPNS FPPPFVSTPA RQQRQPQPLQ QPRFSETRLP 840 THMYPSKPQM GKPGPPPPPP SDSWRARQDV PSNYRYLENQ NQHNASYGGP LQQPQLLPGP 900 SWEGNEHVGG NQDFESWSPD NSPTRNPGYM YGREPRMNPA RDYMPDRSRQ MNPSGYGGQN 960 RLGNRWPDRG RQ

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

MEDLSEMEIG SSVESFHKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS  60
VKIGKRPRDL LNPKALKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR  120
KLVQLSREKA TRSSEHKELQ DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS  180
GLDDLDKHFV DNIFNLMRKE ETFSGQVKLM EWILQIQNSS VLCWFLNTDG VMILATWLSQ  240
AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSN RARVLLSRWS  300
KLLARIQNMK KPNGMKTSSD SQHDIDEVMG DESWKSNIDI PEDIFATPFE NAENSRRSEA  360
SEPLKLLTAS SDESNKKQIL GVSSSQFRAR RKVQLVEQPG QKSAGRSVQV TRATPVSKGR  420
PMSADDIQKA KMRAQFMQSK YGKSGSSNEN KELKTEGGNK LSTSQASILP VVPKVPVRPD  480
IEEPKKPVTL LLKERETPNR VETSLAPKLR MDLKESILEK CQRIRVLWKT PPEIKLDPEW  540
RVGGGENGKE IEVQRNRNRR EKETIYQRVQ EIPSNPKEPW DIEMDYDDSL TPEIPIEQPP  600
DADGTETQAS LSREGNNAQA WVTSSQGVNS AASLAPALSQ MNGASAAAEP DLELLAVLLK  660
NPELVFALTS GQAANLSSED TVKLLDMIKS GGAGNLNGLG RKMEQRVEVS LPSPTPSSNP  720
GTSGWRADAG RNAFPQQMAT TNNSLLSSAV HMIPSQRLST SQPAVPSYSP DYFPPSMQTP  780
AASEMVLTMK NTHLNNLSNS YNVAERQPNS FPPPFVSTPA RQQRQPQPLQ QPRFSETRLP  840
THMYPSKPQM GKPGPPPPPP SDSWRARQDV PSNYRYLENQ NQHNASYGGP LQQPQLLPGP  900
SWEGNEHVGG NQDFESWSPD NSPTRNPGYM YGREPRMNPA RDYMPDRSRQ MNPSGYGGQN  960
RLGNRWPDRG RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein