PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g505600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 409aa    MW: 45550.7 Da    PI: 6.3148
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g505600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS265.51.8e-81233961374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl......fse 86 
                       l +lLl++Ae v++++  +a++l +  + l+s+ g+++qR++ yft+AL+++  r ++ + ++  ++++   ++  +e++a ++      f e
  Pd.00g505600.m01  23 LAHLLLAFAEKVAKQQYGCARKLQNLCHFLSSSCGNSVQRVVYYFTKALQEKTDReTGRNASEGSESRDVLAMH-FQEAMASSTpalmacFLE 114
                       579*****************9988888888************************93333444333444443333.333333333344444777 PP

              GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                       v P+++++ ++  qaI+e+v++++++H iD+ i+ G++ + L+qaLa+R e p   l++T+vg    +s+e++e tg+rLa+fAe+l++pf+f
  Pd.00g505600.m01 115 V-PFYQITEFAGIQAIVESVASAKKIHFIDLAIKTGGHCIVLMQALATRYECPTeLLKVTAVGV---TSREKIEDTGRRLAQFAEALKLPFSF 203
                       5.***********************************************96655499*******...68************************ PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       +v ++k+++d++ ++++++ gEa aV + + l ++++++ ++es    ++k++++l+P+++v++e ea+hns++F +rf eal yysa f++l
  Pd.00g505600.m01 204 KVAMVKDIKDVNEDTFELEDGEAAAVYCPILLCSTMRQPNCSES----LIKVLRNLNPRLMVITEIEANHNSPTFTNRFNEALLYYSAYFECL 292
                       **9********************************999999988....********************************************* PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                       ++ + r s  r+ +E+ +l+ ei+n++a eg+er+ r+ +   Wr  + e+G+ +++ls +   qa+l+ ++++ +    ++ + + l+ gWk
  Pd.00g505600.m01 293 DVCMDRGSAYRMELEETYLSLEIKNIIASEGKERIIRRMKIDAWRTLFAECGMVEAELSLSSLYQADLVAKQFAcGSCCILDTNGKGLLVGWK 385
                       **************************************************************************888788888999999**** PP

              GRAS 364 drpLvsvSaWr 374
                       + p++s+S+W+
  Pd.00g505600.m01 386 GTPILSLSVWK 396
                       **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MPAHVLGSAP LGLSDQETKD VELAHLLLAF AEKVAKQQYG CARKLQNLCH FLSSSCGNSV  60
QRVVYYFTKA LQEKTDRETG RNASEGSESR DVLAMHFQEA MASSTPALMA CFLEVPFYQI  120
TEFAGIQAIV ESVASAKKIH FIDLAIKTGG HCIVLMQALA TRYECPTELL KVTAVGVTSR  180
EKIEDTGRRL AQFAEALKLP FSFKVAMVKD IKDVNEDTFE LEDGEAAAVY CPILLCSTMR  240
QPNCSESLIK VLRNLNPRLM VITEIEANHN SPTFTNRFNE ALLYYSAYFE CLDVCMDRGS  300
AYRMELEETY LSLEIKNIIA SEGKERIIRR MKIDAWRTLF AECGMVEAEL SLSSLYQADL  360
VAKQFACGSC CILDTNGKGL LVGWKGTPIL SLSVWKFHAV NAKTAKYLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-53GRAS family protein