PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g504760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 467aa MW: 51647.6 Da PI: 5.0022

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g504760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	176	235	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g504760.m01 176 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 235 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MGREKEMGLD IDLSLKIDSK QEKQGEDGDQ GKGEEEEEEE EEDRNDNDDI EQGAKQEEED 60 EQAPRAQNNN QKAAEAAAGK VEDDASVVET SLEENNMKTD QELCVLQMEM SRMKEENKVL 120 RKGVEQTMKD YYDLQMKFTA LHQSNQNKDP QTFLSLDGND PDAVHRPKTI PKRSPMNDGC 180 QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILITTYEG THNHPLPVGA 240 TAMASTASAA ASFMLLESSN HHLLDGTPSN YTQASLPNYY NVPDHRMNPS SHSSSNFRTI 300 NPHDPSKGIV LDLTNNFFDN HNTPQNIPMG SSSSHSSVPP GFSNWMMSTS RSASSYQNPN 360 SITSHLLANS TMSRSSGVGV EDQRSWRGEE NNMSLAENVT AIASDPKFRV AVAAAITSLI 420 NKENHTANHP FGPRDGGENG SSTSNNWALD HQSLSANGKP IRKNSLE

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MGREKEMGLD IDLSLKIDSK QEKQGEDGDQ GKGEEEEEEE EEDRNDNDDI EQGAKQEEED  60
EQAPRAQNNN QKAAEAAAGK VEDDASVVET SLEENNMKTD QELCVLQMEM SRMKEENKVL  120
RKGVEQTMKD YYDLQMKFTA LHQSNQNKDP QTFLSLDGND PDAVHRPKTI PKRSPMNDGC  180
QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILITTYEG THNHPLPVGA  240
TAMASTASAA ASFMLLESSN HHLLDGTPSN YTQASLPNYY NVPDHRMNPS SHSSSNFRTI  300
NPHDPSKGIV LDLTNNFFDN HNTPQNIPMG SSSSHSSVPP GFSNWMMSTS RSASSYQNPN  360
SITSHLLANS TMSRSSGVGV EDQRSWRGEE NNMSLAENVT AIASDPKFRV AVAAAITSLI  420
NKENHTANHP FGPRDGGENG SSTSNNWALD HQSLSANGKP IRKNSLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-46	WRKY family protein