PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g503600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 445aa    MW: 49747.8 Da    PI: 9.1883
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g503600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.22e-13204254155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  Pd.00g503600.m01 204 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 254
                       89********.7******5553..2.26**********99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MRDQIPRPLM VTIVLVIATT GYLLIAFPFL GALYIASVII GFTLGAQLPL VYSIISEIFG  60
LKYYSTLFNF GQLASPLGSY LLTVKVTECY MTKRQGRTLQ SWARPGPKGR TSPALELIVL  120
RWLSSFWLQS HSYRLSFHLF WWREPSHSIR AYDRAAIKFR GTEADINFNV SDYEDDIKQM  180
SNFTKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEIE  240
AARAYDKAAI KCNGREAVTN FEPNSYDGQI MSEAHNGGSD KSLDLNLGIA PPLVYELQKN  300
NSNLSSFPVQ LGCDDIPIHM RTRNENSAPA PMRAQLSHGS MVASEEPPIM SNINSSFFPI  360
QVERATEKRM DVNSFPNWAW QLQGLNGGAP PMPLFSAAAS SGFPSSTATS PPAAVTQLHF  420
PNTTILHHHC SPSTVTNIPG FYCRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.33e-71AP2 family protein