PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g503060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 739aa MW: 83016.9 Da PI: 6.1098

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g503060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.6	6.2e-20	594	690	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ +W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ + Pd.00g503060.m01 594 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSHVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvK 683 79***********************999999****7777*****777777777777.******************..5558 PP EE..EEE CS B3 89 efelvvk 95 + +++++ Pd.00g503060.m01 684 CNKYMIR 690 8877766 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS 60 STPAPVKSDA EEDGERRQQH HHNSYNHRHQ YSQADDQAVD AHALSSTASM EISQPSDLGR 120 EGGAMDCMGA METFGYMDLF ESNEFFDPSS IFQSDSLLME QFQQDDDHQQ LLAPHQLQDP 180 NEATAIIPQQ QQEQEVAVRD EENNKKDDQK ENKEPDDMAM VFLEWLRSNR ETVSAEDLRS 240 VKIKKSTIEC AARRLGGGKE AMKQLLKLVL EWVQTNHLQK RRSNSLTTKD ADIVAQQQQY 300 QDPFQNPNPN TSPRVLESNP SCSFTQTPWM APPPHSAYDH AGGILVPTQP PPPPPAAYPS 360 MMGYIAPDQY VNGPGPYQPS PEYHHMIDSG QPTWPSSPFG MGTAHYGSFP DNNIHLAPPP 420 QHQPQAFAGY GSQYQPYQYF PLNGEHQMMR LGSSATKEAR KKRMARQRRL VSHHRHGHQP 480 QQHLNVQMPD HLLHQQHTRL VGNAADLNCA NSVPLQANPG NWFYWPTATA APSPSPAMMP 540 SITQEAAPPP PVQQMDRPAS TQAQNYNQGR SAAQERQERR QGWKSEKNLK FLLQKVLKQS 600 DVGSLGRIVL PKKEAETHLP ELEARDGISI PMEDIGTSHV WNMRYRYWPN NKSRMYLLEN 660 TGDFVRANGL QEGDFIVIYS DVKCNKYMIR GVKVRQAGPK SEGNKRPGKS QRNQHANTPA 720 GTNGSSPSSV STSATHKKQ

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS  60
STPAPVKSDA EEDGERRQQH HHNSYNHRHQ YSQADDQAVD AHALSSTASM EISQPSDLGR  120
EGGAMDCMGA METFGYMDLF ESNEFFDPSS IFQSDSLLME QFQQDDDHQQ LLAPHQLQDP  180
NEATAIIPQQ QQEQEVAVRD EENNKKDDQK ENKEPDDMAM VFLEWLRSNR ETVSAEDLRS  240
VKIKKSTIEC AARRLGGGKE AMKQLLKLVL EWVQTNHLQK RRSNSLTTKD ADIVAQQQQY  300
QDPFQNPNPN TSPRVLESNP SCSFTQTPWM APPPHSAYDH AGGILVPTQP PPPPPAAYPS  360
MMGYIAPDQY VNGPGPYQPS PEYHHMIDSG QPTWPSSPFG MGTAHYGSFP DNNIHLAPPP  420
QHQPQAFAGY GSQYQPYQYF PLNGEHQMMR LGSSATKEAR KKRMARQRRL VSHHRHGHQP  480
QQHLNVQMPD HLLHQQHTRL VGNAADLNCA NSVPLQANPG NWFYWPTATA APSPSPAMMP  540
SITQEAAPPP PVQQMDRPAS TQAQNYNQGR SAAQERQERR QGWKSEKNLK FLLQKVLKQS  600
DVGSLGRIVL PKKEAETHLP ELEARDGISI PMEDIGTSHV WNMRYRYWPN NKSRMYLLEN  660
TGDFVRANGL QEGDFIVIYS DVKCNKYMIR GVKVRQAGPK SEGNKRPGKS QRNQHANTPA  720
GTNGSSPSSV STSATHKKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-138	B3 family protein