PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g501180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 207aa MW: 22424.3 Da PI: 9.3735

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g501180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.5	2.4e-34	57	176	3	103
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 k ++ ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+ a+ +i ++tgt++ +a+ ++++ +s++ +s + Pd.00g501180.m01 57 RKSASSRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRHAESSIVAATGTGTLPAEPISTSAPAVSSQVPSLAcrahpls 149 5778999********************************************************888886664444444444333334455566 PP TCP 89 ............kaaksaakskksqks 103 +++ +a++++++++ Pd.00g501180.m01 150 alngggqfmyplLSSAHQAQPNQPHQQ 176 666666777776333333344444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MGSEMALAPL RNHEDPTLIP TAVLSSAALE TASSRQHSQQ SIQSLQPKTH NQLSQTRKSA 60 SSRDRHTKVN GRGRRVRMPA MCAARIFQLT RELGHRSDGE TIEWLLRHAE SSIVAATGTG 120 TLPAEPISTS APAVSSQVPS LACRAHPLSA LNGGGQFMYP LLSSAHQAQP NQPHQQPSIR 180 LDLCQPAGLD YTECTSMAKQ VYFTTLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	9e-35	TCP family protein