PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g492100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 676aa    MW: 73972.9 Da    PI: 6.2667
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g492100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.51.4e-28213266155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  Pd.00g492100.m01 213 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266
                       79*******************.********************************8 PP
2Myb_DNA-binding39.41.4e-12215265148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qky+
  Pd.00g492100.m01 215 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265
                       678***********************************************7 PP
3Response_reg75.32.4e-25351431109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+p+ +++l+++l+   y ev+ +  +e al+ll+e++  +D+++ D+ mp+mdG++ll++   e  +lp+i+++a + ++ + + + 
  Pd.00g492100.m01  35 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAEIALNLLRENKngYDIVISDVHMPDMDGFKLLERVGLEM-DLPVIMMSADDGKSVVMKGVT 125
                       89*********************.***************999999**********************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +e+l +
  Pd.00g492100.m01 126 HGACDYLIKPVRIEALKN 143
                       **************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MNLSNGMGSM STASSSGAWK SADVVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT  60
KCNRAEIALN LLRENKNGYD IVISDVHMPD MDGFKLLERV GLEMDLPVIM MSADDGKSVV  120
MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWKEVE QSGSVEEGDR QPKPSEDADY  180
SSSANEGTWK NSKRRKDEEE EADERDDSST LKKPRVVWSV ELHQQFVGAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHPSN LNNSFLSPQE ASFGAMSSLN  300
GLDLQTLAVT GQLPAQSLAT LQAGLGRSTA KSGMPMPLVD QRNLFSFENP KLRFAEGQQH  360
LSSSKPMNLL HGIPTNMEAK QLANLHQSAQ SLGGVNMQVN AHGVQNSTLL MQMSQPQSRG  420
QILNETSGTH VPRLSSSIGQ PILSNGIPSG VLGRNGIADN GRGAGYNPVQ QNSSMLNFPL  480
NNSSELPGNN FTLGSTPGLS SLTSKGAFPE DVNCEIKRSS GFAQSYDIFN ELHQHKSNDW  540
DLQNVGLTFD ASQHTNTMHG SLDSSVLVHQ GFSSSQRSAQ SRNPSTVGKA MFSIGEGTHH  600
VNVQNNGQHL NSLIVDNTVR VKAERVPDAS SQTSYFHEQF GQEDLMSALL KQQQEGIGAT  660
ENEFDFDGYS LDNIPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.20.0ARR-B family protein