PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g490120.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 818aa MW: 91915.4 Da PI: 6.8626 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 114.6 | 5.3e-36 | 139 | 214 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+ad++e+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k Pd.00g490120.m01 139 RCQVPSCRADIKELKGYHRRHRVCLACANASTVFLDGETKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRK 214 6************************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 818 aa Download sequence |
MEGPASPSST QSQQQRLDEA RFSEMEIQPP LPNQDTSTVW DWGDLLDFTV DDDLSISWGS 60 AEIDPAPAPA LEDLPEDPDS SSGRVRKRDP RLACTNFLAG HVPCACPEID ERMMELEEEE 120 AGHGKKRVKT ARAPPGTARC QVPSCRADIK ELKGYHRRHR VCLACANAST VFLDGETKRY 180 CQQCGKFHVL SDFDEGKRSC RRKLERHNNR RRRKPINSKG GIRKESQREI QIEDTNCDGG 240 AGEDSIQLSS QLNDKEELPE SEGGRISTLS SVPDSQIVNS DGGASLVASG ETQMDGRKHD 300 SNNSLSPPNC DKSAYSSMCP TGRISFKLYD WNPAEFPRRL RHQIFQWLAS MPVELEGYIR 360 PGCIILTVFI AMPKFMWMKL LEDPVSYIHD FVVVPGRMLS GRGNILVYLN DMIFRVVKDG 420 TSVIKGKVEM RAPRLHYVHP RYFEAGKPME FVACGSDLLQ PKFRFLVSFS GKYLAYNYYP 480 ESSPSQIEGD TATNLDHQLY KIRVPQTEAN RFGPAFIEIE NESGLSNFLP ILIADKEVCA 540 EMNTIQKRYE ESFSLQGSHF SSSGSLSDSC EASSLRHTAF SEVILDIAWL LKKPSSENFQ 600 QIMTASQIQR FNYLLNFLIS IKSTTILEKV SQNLKTLMDN MELHCANDGT SDADMRLLKN 660 YMDYARDRQK IDNSGVLVPR SGRLVQKEDI VSQSQSCFQN VGNLVVPLQC QDTEITVDGR 720 VDVMVGSTSH ERSETVPLLS KKAVMKANLI KKWPRVANFC TFGEVSRSRS SGAFLRFRPV 780 LYVICAAAIC LGFCAVLFHP HKVGEFAVTI RRCLFDNF |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 201 | 213 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |