PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g483080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 741aa    MW: 82883.2 Da    PI: 6.8538
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g483080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS346.54.3e-1063747091338
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++++ +L+arla+++s++ykal +++ts    ++ l+a++l+  +sP+ k+
  Pd.00g483080.m01 374 LRTLLISCAQAVAADDHRSANELLKKVRQHSSPFGDGTQRLAHCLADGLEARLAGTGSQIYKALVSKRTS---AADFLKAYHLYLAASPFKKI 463
                       6789*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+++ N++I++ +++++rvH+iDf+i +G+QWp+L+q ++ R++gpp+lRiTg++ p++g   +e+++etg+rLa +Ae+++vpfe+n+ +ak
  Pd.00g483080.m01 464 SNFVSNKTIMNLAQNATRVHVIDFGILYGFQWPTLIQRISWRDGGPPRLRITGIEFPQPGfrPAERVKETGRRLAAYAEKFNVPFEYNA-IAK 555
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++++++leeL+++++E+l+Vn+ ++ ++lldesv+++s+r++vL+l+++++P+++++   +   n++ F++rf eal ++s+lfd+le+ +pr
  Pd.00g483080.m01 556 NWDTIKLEELKIDRDEVLVVNFLYRGKNLLDESVAVDSPRNRVLDLIRRINPDLFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLETVVPR 648
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
                       e++er+ +E e++gre+ nv+aceg er+er et+++W+ r  +aGF ++pl+   +k a+
  Pd.00g483080.m01 649 EDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQLPLDRWLVKRAE 709
                       ***************************************************9988777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 741 aa     Download sequence    
MDRRLRAFSD SVNGVQLGNR VLPILSHPNI VARSQFDSNT FLDNSYREFN NPQPVLTSNN  60
VSSYASVSPE DDSQEDCDFS DVVLKYINQM LMEEDMEDKT CMLQESLELQ AAEKSFYEVL  120
GKKYPPSPEL HQDYAIQYGE SPGDSFSGTG SNYITRTCNS GGYFSDNTLI QSPDGYLSQL  180
KGLPAYSISQ SRYGSSTRVS SLDGQVNSPS SLHMPDLNTE SQSVWQFKKG VEEASRFLPG  240
ETNLVVNLEA NGLSAQAPKV RTNGEVVKVE KKDEGEYSPR GSRGRKNLYK EDDDVEESRS  300
SKQAAVSTES TLRSELFDTV LLCSTGEGLE RLESLREALQ NGMSKSVPQN GQSKGSNGGK  360
GRGKKQSKKE VVDLRTLLIS CAQAVAADDH RSANELLKKV RQHSSPFGDG TQRLAHCLAD  420
GLEARLAGTG SQIYKALVSK RTSAADFLKA YHLYLAASPF KKISNFVSNK TIMNLAQNAT  480
RVHVIDFGIL YGFQWPTLIQ RISWRDGGPP RLRITGIEFP QPGFRPAERV KETGRRLAAY  540
AEKFNVPFEY NAIAKNWDTI KLEELKIDRD EVLVVNFLYR GKNLLDESVA VDSPRNRVLD  600
LIRRINPDLF IHGIVNGAFN APFFVTRFRE ALFHFSSLFD MLETVVPRED RERMLIETEI  660
FGREALNVIA CEGWERVERP ETYKQWQVRN LRAGFVQLPL DRWLVKRAET SKGTVISACN  720
LLLSLLAFNK DTGAIRGEGG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein