PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g483010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 360aa MW: 38978.5 Da PI: 9.802 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 138.7 | 1.7e-43 | 58 | 135 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+ak y++rhkvC hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g483010.m01 58 RCQVEGCQVDLSDAKPYYSRHKVCGLHSKTPMVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 135 6**************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MGHCQSLNGL KFGRKIYFED AGLGAPYKSG SAGSSSSGAT PPKKQRGVNL AQPGQPPRCQ 60 VEGCQVDLSD AKPYYSRHKV CGLHSKTPMV IVAGLEQRFC QQCSRFHQLP EFDQGKRSCR 120 RRLAGHNERR RKPQPGSILS ARFGRLSSSI YENSSRVGSF LMDFTAYQRL SGRDAWATTR 180 MSERVPGNQN SNDMGKFLQH PWQSNSEITP SGLYLQGSAG GTSYPGAGIP PGECVTGVTD 240 SSCALSLLSS QPWGSRNRVS GVGMNTVINT QGPPVGQPIT HAGTSNHFPT TSWGFKGNAG 300 SSSHEMLPDL GLGQMSQPPL STQYSGVLEL SQQSSTRQQQ MELGHTRGYD TSSQHIHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 6e-71 | SBP family protein |