PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g476400.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 259aa MW: 28892.8 Da PI: 4.8002 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 39.5 | 1.9e-12 | 89 | 164 | 2 | 81 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +Y++Y+++ GF v k++s++ ++g+ + t C +egk+++++++ ++r++ + +Cka+++ ++ +gkw+v+++ Pd.00g476400.m01 89 YYKQYGRQSGFPVIKRSSTNG-DDGNLKYVTISCAREGKSKSKSSN---FLKPRPSIKNDCKAQFRASLLLNGKWKVNSI 164 8************99987776.9999***************99888...999*************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence |
MGTRVSASES EDTSHINNNS PIDQGMEESS ARLENNQHDD AVEMNFNGIE KENNGDETEN 60 NDNVMSVEEK VQDPQVGMIF DSIDEVITYY KQYGRQSGFP VIKRSSTNGD DGNLKYVTIS 120 CAREGKSKSK SSNFLKPRPS IKNDCKAQFR ASLLLNGKWK VNSIPAQSDV FCHTDAPPIC 180 ESDNLVGTQE SNNVVMLLGL THGGHPDQLY KRPLTGNITY PTIHENYFQG DQYQNWNGGS 240 GLYNLALVQE EMITKNSRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G43280.1 | 3e-09 | FAR1 family protein |