PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g468980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 296aa MW: 31625.8 Da PI: 7.869 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 119.7 | 3.5e-37 | 58 | 161 | 2 | 104 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ +++ Pd.00g468980.m01 58 APKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsapv 143 799*************************************************************9999855521111.......122211222 PP TCP 89 .kaaksaa.kskksqksa 104 + ++ + k+k++++s+ Pd.00g468980.m01 144 pRPGEDPPdKKKRKRNSN 161 222222222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MTMTEKRELE PDQATTSVDL RINGGEESDS EEPAGPSQAL MLAPKDERDV AMPVAVHAPK 60 RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPAIIAATG 120 TGTVPAIAMS VNGALKIPTS APVPRPGEDP PDKKKRKRNS NSEYVDLNDG VSASAGLAPL 180 TTERHHQLPP TAAVQAVVPQ GVLPMWAIPS NGVVPGAFFM VPSSSTQPHI FTFPTTVAAA 240 PFINISARPI SSFVGPSSAS ATTHMAASTA PQTLRDFSLE IYDKKELQFM SGSSNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 2e-81 | TCP family protein |