PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g468770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 602aa    MW: 67860.3 Da    PI: 6.3189
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g468770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.95.2e-09206242138
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 
                       kp+l+Wt+eLH+rF+ av+ L G +   P  i  +m+ 
  Pd.00g468770.m01 206 KPKLVWTNELHKRFLLAVRLL-GVDSKSPLDIGSVMNF 242
                       79*******************.99999********996 PP
2Myb_DNA-binding32.22.5e-10208289148
                       TSSS-HHHHHHHHHHHHHTTTT.................................-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.................................tWktIartmg.kgRtlkqcksrwqkyl 48 
                       ++ WT e++++++ av++lG +                                 ++k+I ++m+  g+  +++ s++qky+
  Pd.00g468770.m01 208 KLVWTNELHKRFLLAVRLLGVDskspldigsvmnfftllgaietkianlfldlgaHPKKILQHMNvPGLRKENVSSHLQKYR 289
                       679******************************************************************************7 PP
3G2-like377.4e-122622902755
           G2-like  27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       A Pk+il++m+v+gL  e+v SHLQkYRl
  Pd.00g468770.m01 262 AHPKKILQHMNVPGLRKENVSSHLQKYRL 290
                       78**************************8 PP
4Response_reg52.62.6e-18241311108
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vd + + + +l ++l + gy +v +a+ + +al ++++k+   +l+l+   +p+md +ell+++++ + k+p++++++ ++e+ +l  l 
  Pd.00g468770.m01  24 VLVVDGDSACLAILSRMLCNLGY-KVMTAKRAYDALSIAQKKEdeLHLVLTEAHLPDMDKYELLEKMKAVS-KVPVVIMSDDDDESAMLGGLF 114
                       89*********************.***************888889***********************999.********************* PP

                       TTESEEEESS--HHHHH CS
      Response_reg  92 aGakdflsKpfdpeelv 108
                        Ga  +++Kp  ++ l 
  Pd.00g468770.m01 115 KGAVFYFVKPLTINSLK 131
                       ***********999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MSDEKAISVE SVNSSSPRLE SVSVLVVDGD SACLAILSRM LCNLGYKVMT AKRAYDALSI  60
AQKKEDELHL VLTEAHLPDM DKYELLEKMK AVSKVPVVIM SDDDDESAML GGLFKGAVFY  120
FVKPLTINSL KNLWQFAFIK NRNHVVIDLT EEETSVYAES QKENTSNEGL ESESLMTRDR  180
WLKRKNPEGT YKDEETENSD STSQKKPKLV WTNELHKRFL LAVRLLGVDS KSPLDIGSVM  240
NFFTLLGAIE TKIANLFLDL GAHPKKILQH MNVPGLRKEN VSSHLQKYRL SLKREQEAIM  300
KARARGPKKS NFPSHQSLST LNFRGGCSHT PNWYSTSTAY QPKRRSHVQD LSSHMSRPSP  360
TGSVCFPSQV YSSGHPTLSN ESSFPSMPYH SNYKKGQPTL NNQLDYTNYH NTNHIGNRIT  420
SNKELAGFRQ VGSFVRYSNF DGNENFSTFG DHGHSNLEDF PIFLHNSTQQ EEQQQKQLQP  480
QVLFSPPLQM PSPPLQPQEQ QENDILGQER QLQPQFLPSP PLQMPSPSPL PAAAEQQGEQ  540
DDIFGLEKQL MQSPQWHMPS MPSMPAAPTA HEQEKDDMFG IESEETDGLF DIAKGTTQHF  600
ND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1343347KRRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-52ARR-B family protein