PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g465930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 494aa MW: 55073.6 Da PI: 7.818 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.2e-17 | 147 | 196 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g465930.m01 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 196 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRLAKT RGGGGGKIFG FSMTHEESMD 60 SDPPVTVTRQ FFPVELDSTS EIMGPTRGSV PPPAPPSSSL SSYPRAHWVG VNFGQSDSGS 120 PGKPPAAVEP AHQPMKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 180 HAAARAYDRA AIKFRGVEAD INFSIEDYEE DLKQMTNLTK EEFVHVLRRQ STGFPRGSSK 240 YRGVTLHKYV YLGLFDTEID AARAYDKAAI KCNGKEAVTN FDPSIYENEL NPSSEHNLDL 300 SLGNSNSKKN NQAFGSSDHG QNAAVEVQHS ASMQLEADWR NQGFRQKLNL QRDRSREESD 360 AHRRDGYLET EAMQLLLRTN LHSPAPTEMH KYGQFSRRPN VGDTQMPHTF PPHFNSPNNY 420 HHVQFSSSSE GGRIGSDLSL SMSDHPHQQQ WQSGMPTSDI FATAAASSGF PPQIRPSAQN 480 CWLQKSGFHS LTRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 2e-95 | AP2 family protein |