PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g463400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 393aa    MW: 43732.6 Da    PI: 9.4698
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g463400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.68.1e-192558134
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                      C+ C+tt+TplWR gp g++tLCnaCG++yrk++
  Pd.00g463400.m01 25 CTDCHTTTTPLWRGGPAGPRTLCNACGIKYRKRK 58
                      ********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MDQRQKGSEA EHMNQSSIAP PSKSCTDCHT TTTPLWRGGP AGPRTLCNAC GIKYRKRKRA  60
LVGLNKGATG TERRKHKTIG APLKLGLKSM EREMVEMLYI YAWWLFRTCS MVDICYQIVI  120
IKLRPHCVLL VAGALLLIVA AAVAPRSRSV WVLSNQSQSL RPGHASAMAS RPADPALHAG  180
DCEADPVVTN GDPQRQVDKP PSSWGKGKGT GTEPVSPPNK PSYPNASFPR LEKTDVTLQP  240
DPSDHPINYT QKRRASQYAT AATGLSLENF DLEKVSCVGL DGTPWPRDKE NEEHKTDRDR  300
EDEREYYKHH KASPLSEIEF ADTRKPITRV MHGTAAVSEY GAGRDVIRWR PEQLDTAEEA  360
LRRAARIWKE NAMRGDPDAP HSRVLRALRG ESF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-16GATA family protein