PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g459560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 93aa MW: 10351.8 Da PI: 3.8072

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g459560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	38.1	4.4e-12	2	60	43	101
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +++l+ lp +er a ++++eA+ar dP+yGa++ il+lq+q+ +++a+l++++e+l Pd.00g459560.m01 2 SRILSMLPMSERAVASWTMTFEAHARDVDPIYGATSYILDLQEQVLNMQAQLDEAQEQL 60 57899999**********************************************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence
MSRILSMLPM SERAVASWTM TFEAHARDVD PIYGATSYIL DLQEQVLNMQ AQLDEAQEQL 60 ACAIAPVADP NQDLENSIEQ YEVAILVGVI KIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	1e-12	LBD family protein