PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g457980.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 442aa    MW: 48242.2 Da    PI: 6.7003
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g457980.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.4e-17132181155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Pd.00g457980.m02 132 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 181
                       78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG  120
EKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR  180
GVDADINYNL SDYEEDLKQM KNLTKEEFVH ILRRQSTGFS RGSSRYRGVT LHKCGRWEAR  240
MGQFLGKKAY DKAAIKCNGR EAVTNFEPST YEGEMISEAG NEDGDHNLDL NLGISPPSFG  300
NCQKEVEGHL QFHSGPYDGH NGNRMEHNVN ATMSDPPFKG LVMTSQHPPL WNGVYPSYFS  360
NQERATEKRI ALGSQGPPNW AWQMHGQVSA TPMPLFSTAA SSGFSFSATA PSAAVHPLQP  420
STPTALNLCF TSPATAAANT SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-107AP2 family protein