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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g453590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HB-other | ||||||||
Protein Properties | Length: 1117aa MW: 126047 Da PI: 7.0245 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 36.2 | 1.1e-11 | 8 | 58 | 7 | 57 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+Le+++ ++ryps++++e A+ +Lt +qV+ WF +R +ek+ Pd.00g453590.m01 8 KTQSQLEALESFYSEDRYPSRTAMECHAAAFRLTYKQVRGWFVEKRRREKR 58 699**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1117 aa Download sequence |
MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN 60 KTTEELGGRN GSGAGAPRVV KHCPSKAPSL SRYKQTKMNG NHIQELLTPD YILKKVFRKD 120 GPPLGVEFDS LPSRALFHST NPEDLHPPCK ENQRETKRRK VTEHAVIGHQ NCNESAPVKK 180 HGVGKGLMTV WRATNPDARD FPVDMGFANG GVTSVSLIPT SVSRKPVTRN RRLQQKKSVP 240 KQGRVRNKVQ EKRKHFVKRR EVESNNENQT LPSKEKCELA LEGASSQEHS DKIAMLVDDE 300 ELELRELQGR PNALGCSDHF TTNGDHACSL CKDLLAKFPP NSVKMKQPFC MQPWDSSPEI 360 VKKLFKVFHF LCTYAVMVDI SSFTIDEFAQ AFQDKDSLLL GKIHVALLKL LLSNVEVELG 420 CGSIPHLSKS CNFLAFIHSV ENQESTLEYW KRSLNPLTWT EILRQVLVAA GFGSKQGAMR 480 RDALSKEMSL MVKYGLRPGT LKGELFRVLL EQGIHGLKVS ELAKSLQISE LNLSSGIEDL 540 ESLIGSTLSS DITLFEKISS STYRVRINSS EKEVEESQSD TEDSGAVDDD LGDSGTCSSD 600 DDSGCNSGNF QIKKLTYMNH GKSKDNMVTV YTEIDESHPG EVWLLGLMEG EYSDLSIEEK 660 LSAIVALIDL LHAGSSFRME DPINAIAECV PSSLHSGSGA KIKRLSTKQH GMPRPTWVHA 720 GHTSGAKEDY TLKFHPIDSS GSISKFSDER FSTKEKNGKE REVRFDIHPM QSVFLGSDRR 780 YNRYWLFLGP CNAYDLGHRR VYFESSEDGH WEVIDTEEAL CALLSVLDDR GKREALLIES 840 LEKRIAFLCQ AMSSRMVNSD RIDNLAQSDQ SELDSVREDT YSPVSDVDNN LSGIANDSVP 900 SSGVVVLEVR KKGEQQKQKW SRIQAFDSWL WNSFYLDLNA VKHGKRSYFD TLTRCESCHD 960 LYWRDEKHCR ICHTTFELHF DLEERYAIHV ATCKEKEASD TFPKHKVLSS QIQSLKAAMH 1020 AIESAMPEDA LLGAWKKSAH KLWVLGDFVG AINEDRLYEC NIEQGSCNFS EELIASFACM 1080 PQTTSAVALW LVRLDALIAP YLERAHSQKR LEISVRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12750.1 | 0.0 | HB-other family protein |