PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g452540.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 503aa MW: 55561.8 Da PI: 6.3262

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g452540.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.6	1.8e-14	223	274	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + +r+ ++lg ++ +++Aa+a++ a++k++g Pd.00g452540.m01 223 SIYRGVTRHRWTGRYEAHLWD----NsCRREVYLGGYDKEDKAARAYDLAALKYWG 274 57**************999....4456******99***********98 PP
2	AP2	49.9	7.9e-16	317	368	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Pd.00g452540.m01 317 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 368 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MSPMEMLRSS ESESPFVPYD TSSTASPHYF LDNFYANGWT NPKSQGFFAD GEDHNNQSKQ 60 GHADSPNLTS FIDPQSHHQP IPKLEDFLGD SSSMVRYSDS QTETQDSSSL THMYDQSSAY 120 FGDHRQQQDL KAITGFQAFS TNSGSEVEDS ASMARTTQLA GGEFTGHSIE SNGNELGGGF 180 SSCGTNALSL GVTTQSSSQS KAIVPADSDG SKKIADTFGQ RTSIYRGVTR HRWTGRYEAH 240 LWDNSCRREV YLGGYDKEDK AARAYDLAAL KYWGPTATTN FPVSTYSKEL EDMKHVTKQE 300 FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD 360 IAAIKFRGIN AVTNFEMNRY DVEAIGKSSL PVGGAAKRLK LSLEAEEQKP SVNHDQQRPQ 420 CSSGSNNINF TSMQPAVQSI PCGIPYDAAA ATAYYHHNLF QQFQPNYYGA CDSSGLTPSI 480 ATQMSMMPQQ PAEFYIWPHH QSN

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MSPMEMLRSS ESESPFVPYD TSSTASPHYF LDNFYANGWT NPKSQGFFAD GEDHNNQSKQ  60
GHADSPNLTS FIDPQSHHQP IPKLEDFLGD SSSMVRYSDS QTETQDSSSL THMYDQSSAY  120
FGDHRQQQDL KAITGFQAFS TNSGSEVEDS ASMARTTQLA GGEFTGHSIE SNGNELGGGF  180
SSCGTNALSL GVTTQSSSQS KAIVPADSDG SKKIADTFGQ RTSIYRGVTR HRWTGRYEAH  240
LWDNSCRREV YLGGYDKEDK AARAYDLAAL KYWGPTATTN FPVSTYSKEL EDMKHVTKQE  300
FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD  360
IAAIKFRGIN AVTNFEMNRY DVEAIGKSSL PVGGAAKRLK LSLEAEEQKP SVNHDQQRPQ  420
CSSGSNNINF TSMQPAVQSI PCGIPYDAAA ATAYYHHNLF QQFQPNYYGA CDSSGLTPSI  480
ATQMSMMPQQ PAEFYIWPHH QSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-174	AP2 family protein