PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g452420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 350aa MW: 37003.6 Da PI: 8.5656

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g452420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.1	1.1e-39	27	87	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++ Pd.00g452420.m01 27 PEQSLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 87 68999*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MMSSDNTPPG KPPPGTKGGA KQQHPPPEQS LKCPRCDSPN TKFCYYNNYS LTQPRHFCKT 60 CRRYWTKGGA LRNVPIGGGC RKNKRVRSSS SNSRLSCSLD SKDSAGSSSS ENMMLGGLKF 120 FHGISPAMDF QLGGLSSLPS RLHHNPSSGI SYNNNNNQFS AFGDVSGTSG LTISTPLDTS 180 ASCNSFLGFN YPLTLGGGGG GGAGGGGDGF SATQNMMSSM NVHSSLASSI ESLSSINQDL 240 HWKLQQQRLA MLFGSGNDHD QSTQTTQSQL EQQQKTQQIA PISLREGASA SGDTATEWFF 300 GNSYAPPVTP TPTNSGGGNG GGGGNENTSN WQHGIQAWSS HDLQQYNALP

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MMSSDNTPPG KPPPGTKGGA KQQHPPPEQS LKCPRCDSPN TKFCYYNNYS LTQPRHFCKT  60
CRRYWTKGGA LRNVPIGGGC RKNKRVRSSS SNSRLSCSLD SKDSAGSSSS ENMMLGGLKF  120
FHGISPAMDF QLGGLSSLPS RLHHNPSSGI SYNNNNNQFS AFGDVSGTSG LTISTPLDTS  180
ASCNSFLGFN YPLTLGGGGG GGAGGGGDGF SATQNMMSSM NVHSSLASSI ESLSSINQDL  240
HWKLQQQRLA MLFGSGNDHD QSTQTTQSQL EQQQKTQQIA PISLREGASA SGDTATEWFF  300
GNSYAPPVTP TPTNSGGGNG GGGGNENTSN WQHGIQAWSS HDLQQYNALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-43	Dof family protein