PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g446820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 363aa MW: 41057.5 Da PI: 8.8807

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g446820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	90.4	2.4e-28	199	286	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p Pd.00g446820.m01 199 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 286 9***************************************9988..9************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MMSLVGLAEA SVRVERKLVL GLENLTWKRQ KMWQERRENA MLMCDDLRIE EALRTAIPNT 60 ALAILLTNFQ GEREQRNKTA RSRTRPDLNR YGPAVYNTSC DSTSPGSSRI FMEFSVDGDV 120 SGEVVGSSAE LEISRAGDEN ETGGSSIEGA YQLGQDDKMN QDSPGKGIIP QAVPVVSVVP 180 ADEPYVGQEF ETEAAAHAFY NAYATRVGFI IRVSKLSRSR RDGSAIGRAL VCNKEGYRMP 240 DKREKIVRQR AETRVGCRAM ILVRKVSSGK WVVTKFVKEH THPLTPGKGR RDCIYDQYPN 300 EHDKIRELSQ QLAIEKKRAA TYKRHLDLIF EHIEEHNESL SKKIQHIVES VKEIEGKEQQ 360 QHR

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MMSLVGLAEA SVRVERKLVL GLENLTWKRQ KMWQERRENA MLMCDDLRIE EALRTAIPNT  60
ALAILLTNFQ GEREQRNKTA RSRTRPDLNR YGPAVYNTSC DSTSPGSSRI FMEFSVDGDV  120
SGEVVGSSAE LEISRAGDEN ETGGSSIEGA YQLGQDDKMN QDSPGKGIIP QAVPVVSVVP  180
ADEPYVGQEF ETEAAAHAFY NAYATRVGFI IRVSKLSRSR RDGSAIGRAL VCNKEGYRMP  240
DKREKIVRQR AETRVGCRAM ILVRKVSSGK WVVTKFVKEH THPLTPGKGR RDCIYDQYPN  300
EHDKIRELSQ QLAIEKKRAA TYKRHLDLIF EHIEEHNESL SKKIQHIVES VKEIEGKEQQ  360
QHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-99	FAR1 family protein