PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g446740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 295aa    MW: 34229.8 Da    PI: 8.2054
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g446740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.61.5e-26122213191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY+ Y++++GF++r++++++s +++ i+ r+fvCskeg+r+e+    +++r   +r+ tr gC+a+l+++ ++ gkw+++ +++eHnHel+p
  Pd.00g446740.m01 122 DFYEMYGRHMGFTIRNNRTRRSLKDNAIIGREFVCSKEGFRAEKYAM-SQNRVlpSRPATRKGCNAMLRITAKDGGKWVIYGFVKEHNHELNP 213
                       6*********************9********************9887.33333459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MIRVPFFLRM GSSIDSKTSF ADQFTKISDC RTQKNAKIIL GFQFLLLARL MMASTSGQGF  60
SPERNYRCWL DETFSSHETA DDELSYTPDV DNNLIETSSQ DFSLSLEPVI GMEFKSAEDA  120
RDFYEMYGRH MGFTIRNNRT RRSLKDNAII GREFVCSKEG FRAEKYAMSQ NRVLPSRPAT  180
RKGCNAMLRI TAKDGGKWVI YGFVKEHNHE LNPNKIPPRR SHRIAFCEDE KDLKIRELST  240
ELHREKKKSA AYQEKLQIVL KYIEEHTQRL SLKVELATNN MRELESEEQD SSYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-46FAR1 family protein