PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g441610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 483aa MW: 53667.3 Da PI: 7.2539

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g441610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	57.6	3e-18	59	108	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + + +r++lg+f tae Aa a++aa+++++g Pd.00g441610.m01 59 HYRGVRQRP-WGKFAAEIRDP---N-KaARVWLGTFETAEAAALAYDAAALRFKG 108 7******.******9...3.35*********************9987 PP
2	AP2	59.2	1e-18	294	343	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+W+AeIrdp + r +r +lg+++tae Aa a+++a+++++g Pd.00g441610.m01 294 HYRGVRQRN-WGKWAAEIRDP---N-RaARLWLGTYDTAEAAALAYDKAALSFKG 343 69**998.******8...3.47********************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MSAMVSALAQ VIGTTDQTPV VQVPAEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY 60 RGVRQRPWGK FAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ 120 GGTELGYLTT TGPEDLAAGG SRRTELAHHN QPLSDHQYQL QANPNNVNLT QPDQYAQYFR 180 GAAPAGDFSN IYIIFCQYIN SQFDKVDRKH GKRPLPSDES EAKEEDQTFP VYSSRSQHDT 240 SVMISALAQV IGNTDQTPLQ QVQGNPLITS QSSPAEIQSQ PALQDQGNVI RRQHYRGVRQ 300 RNWGKWAAEI RDPNRAARLW LGTYDTAEAA ALAYDKAALS FKGSKAKLNF PERVQESSEF 360 GNLTITSQQQ HNLNNPENVE RVQVTDPVVP NPPHQPISQP TYSNVVNYAP YVQGESNNVD 420 YNVHQVLPSH ENYGPQILPT TSSTSSSMPS QQEELRRMQV GSSRSSSDLP NKHRKDFEGS 480 HSR

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MSAMVSALAQ VIGTTDQTPV VQVPAEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY  60
RGVRQRPWGK FAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ  120
GGTELGYLTT TGPEDLAAGG SRRTELAHHN QPLSDHQYQL QANPNNVNLT QPDQYAQYFR  180
GAAPAGDFSN IYIIFCQYIN SQFDKVDRKH GKRPLPSDES EAKEEDQTFP VYSSRSQHDT  240
SVMISALAQV IGNTDQTPLQ QVQGNPLITS QSSPAEIQSQ PALQDQGNVI RRQHYRGVRQ  300
RNWGKWAAEI RDPNRAARLW LGTYDTAEAA ALAYDKAALS FKGSKAKLNF PERVQESSEF  360
GNLTITSQQQ HNLNNPENVE RVQVTDPVVP NPPHQPISQP TYSNVVNYAP YVQGESNNVD  420
YNVHQVLPSH ENYGPQILPT TSSTSSSMPS QQEELRRMQV GSSRSSSDLP NKHRKDFEGS  480
HSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07310.1	3e-38	ERF family protein