PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g440900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 403aa MW: 44234.2 Da PI: 8.243 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.8 | 2.3e-41 | 94 | 170 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls +++yhrrhkvCe hsk+p+v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ Pd.00g440900.m01 94 CLVDGCNSDLSVCRDYHRRHKVCELHSKTPQVTINGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 170 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MDWNLKAPSW DLAELEQETF SNLGTVDGSS SFGDHRTIKG NFSVDLKLGR LGDSGNNELV 60 DMLKEAGGPK TTSSPSGPSK RSRAAYSGSQ TVSCLVDGCN SDLSVCRDYH RRHKVCELHS 120 KTPQVTINGQ KQRFCQQCSR FHSLEEFDEG KRSCRKRLDG HNRRRRKPQP EPLSRSGSYL 180 SSYQGTQLLP FSSSLVYPST TVVNPTWAGV VKAEADTGLH NQHLQLPLID KQNMFLGSST 240 STSSTYKGGK QFSLFQSSLL HNQTSHHGAS VCQPLLNTIS FSDTGGGAKS KMFCDRLTTQ 300 IHDSDCALSL LSSPQTQQTS EIGLRHMVQQ PNSISLMQQR LGPGSLHGNN SIEPMDSVLV 360 SNGSEANVHC PGMFHIGSDG SLGNNQQHQH QHQAPQTLPF HWQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 168 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 8e-75 | SBP family protein |