PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g437120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 327aa    MW: 37751.4 Da    PI: 6.6772
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g437120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.12.2e-0666123651
                       S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51 
                        ft++++ e+e+l +   ++ +s+e  ++LA++           ++t +qV+ WFqN+
  Pd.00g437120.m01  66 VFTHSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 123
                       69***********99555***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAEILSFQLA TGSKSRRHRS SSEPRLLSKP PLGVELRLKT QKPREKEMDM ELFRTRKREP  60
MNSLSVFTHS EIMEMENLIK HPRQQSLSQE FFQDLATSFS CTPIRAGKPD ITWEQVQSWF  120
QNKQKELQAN SNSSPTALEL FVDLSDSNVS SNATENSQKP KGKWSTELHE LAFEARSARD  180
DAWYDVASFL SYRVVNSGEL EVRVRYSGFG REDDEWVNVT RAVRERSIPL EASECHKVKV  240
GDLVLSFQER EHQAVYCDAH VVDIQRGLHD VTGCKCIFVV RFDHDNTEEE IQLGRLCIRP  300
AQNTSAVTNT QQHDLFRNKD MKFSFLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.13e-59HB-other family protein