PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g437060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 323aa    MW: 35310 Da    PI: 6.1839
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g437060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.2e-17217251135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C + kTp+WR gp g+ktLCnaCG+++++ +l
  Pd.00g437060.m01 217 CLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRL 251
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MELPEFYLGG YFDAGAADFL PEKKPATAGD QFTVDDLLDF SNEDALVAEG GFLDPAADSS  60
AVTAVDSCNS SVSGGEPQFS SNRSFSDSQF SGDLCVPHDD LAELEWLSNF VEDSFSAEKD  120
LQALQFLSMT TTKPETPETS SSSETNQNAP LFHSETPLPG KARSKRSRAA PGDWSTRLLH  180
LITPNDTIKP PKTTTCKKKD GIVGNSNSGS DSSGQKCLHC AAEKTPQWRT GPMGPKTLCN  240
ACGVRFKSGR LVPEYRPAAS PTFVSARHSN SHRKVLELRR QKEVHRSHQH QFLSQSSIFG  300
VSNGGHDEYL IHHHNVNDFR QMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-68GATA family protein