PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g430710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 500aa    MW: 57305.9 Da    PI: 7.8015
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g430710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.46.3e-2069143189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fY+ YA+++GF+vr+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+++++gkw+v+ + ++HnH l
  Pd.00g430710.m01  69 DFYSLYATRMGFRVRTGQLYRSRTDGSVSSRRFVCSKEGFQIS--------------SRTGCPALIRVQRRDSGKWVVDLFLKDHNHGL 143
                       6***************************************765..............699***************************98 PP
2FAR167.82.8e-21223298190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY+ YA+++GF++r+ +  +sk +g+it+r+fvCskeg++++              +r+gC a +++k++++g+w+v++l+++HnHel 
  Pd.00g430710.m01 223 QFYHVYAENTGFRIRIGQLFRSKLDGSITSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRQDSGRWVVDRLDKNHNHELE 298
                       6***************************************999..............4899***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MGMESSSTHF TIMRSSDTDS KIEDSGNNLV LKAYPMLPMK TVNAEDEGES RVLEPYVGLE  60
FDSADVARDF YSLYATRMGF RVRTGQLYRS RTDGSVSSRR FVCSKEGFQI SSRTGCPALI  120
RVQRRDSGKW VVDLFLKDHN HGLGFTEENH SPILQKNTLT RKNSIVELSH RPKIKSIEEI  180
EDGRPCPSGI ISAKRFKWDG DEMQPEVEPS AGLEFNSANE AYQFYHVYAE NTGFRIRIGQ  240
LFRSKLDGSI TSRRFVCSKE GFQHPSRVGC GAFMRIKRQD SGRWVVDRLD KNHNHELESQ  300
LEVQKTNLFS SKKFIEEEIG GLENEDIVDI NNGNNVQRRR ENHIGSDWIF QKELLQSYSY  360
LGFKIYEEGA TIRYLVRKCG NDNEKCVVTV GPSNPKVICS CRMFEFEGVL CRHVLRVFQI  420
LDLKEVPPCY ILQRWTKNAE YGIPCDSESG GNPQELKALM VWSLREAACQ YIEAGATSLE  480
KHRLAYEIMR EGGRKLCWQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-128FAR1 family protein