PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g419530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 133aa    MW: 14539.3 Da    PI: 5.2374
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g419530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB150.33.8e-471811797
             NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                      mkk+lP+n+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy+epl++yl++yreleg+ 
  Pd.00g419530.m01  1 MKKALPQNGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELEGDA 81
                      9******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MKKALPQNGK IAKDAKDTVQ ECVSEFISFV TSEASDKCQK EKRKTINGDD LLWAMATLGF  60
EDYIEPLRIY LARYRELEGD AKGSARGGDG SAKGNAVGAM PGPSSQFVHQ GSLNYVNPQE  120
EYYVPLNNMG NGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.14e-62NF-YB family protein