PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g419150.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1723aa MW: 187851 Da PI: 6.5117

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g419150.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.4e-10	805	848	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + G++ +++Ia+ + ++t +c+++++k+ Pd.00g419150.m02 805 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 848 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1023	1063	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g419150.m02 1023 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1063 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1723 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPPHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE VKVESQLKNA 240 TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSASGNSSM LLGSEIVAPV 600 SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL 660 IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KRYRNSLKMP ALILDKKEKM 780 VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA SFLDHKTTAD 840 CVEFYYKHHK SVCFEKTKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA 900 AHADGSTRSR QAYSGRLFLG GYRNTNPSRG DDTTVERSCS FDAIGNERET VAADVLAGIC 960 GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLTP DVMQNVDDET CSEESCGEMD 1020 PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN 1080 GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ 1140 TGPLRSEENN VMGQLDHKGV QTLKSLASDA LEAEDRPNLV LDDADCVRDA QKSRVFSADA 1200 LKDDVAEEGI LIAESEPVGG RINFDPTNPG MDGEKLMGEL SSDGNTDTSR CSLPGSVHDS 1260 NSSGNASALA GGGSCSGFSL NPECLHQVSV GLNSMQKPSV ISMPHENRHA PADSVSQDSA 1320 KIECEKAFNQ DRLSSTLDLQ EGREPKSVGI DECHQHLPGL PIYTNVESSQ VLKGYPLQMA 1380 TKKDTNGDVM SGNLSEVQNF SKPDRKINGH YMTKDGFLQF GNCKPQCSEV DFPLAPQKVE 1440 QPVGPPKAHS WSSSDSDKPS RNGDVKLFGK ILSNPSSLSK SSSNIHENEE KGAHNHKLSN 1500 TSSNLKFTGH HNADGNSSLL KFDCSSYLGI EKVPRRSYGF WEGNKVHSGY PSFSDSAILL 1560 AKYPAAFGNF PTTSSKMEQQ PLQAVVKNND RNINGVSVFP SREISGSNGV VDYPVFSRSR 1620 DGAKVPPFTV DVKQQQQRQD VFDMPRRNGF DTISSLQQQG RGIVGMNVVG RGGILVGGPC 1680 TGVSDPVAAI RMHYAKTEQY GGQPGSMIRE EESWRGGKGD VGR

Sequence ? help Back to Top

Protein Sequence Length: 1723 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPPHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE VKVESQLKNA  240
TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSASGNSSM LLGSEIVAPV  600
SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL  660
IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KRYRNSLKMP ALILDKKEKM  780
VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA SFLDHKTTAD  840
CVEFYYKHHK SVCFEKTKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA  900
AHADGSTRSR QAYSGRLFLG GYRNTNPSRG DDTTVERSCS FDAIGNERET VAADVLAGIC  960
GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLTP DVMQNVDDET CSEESCGEMD  1020
PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN  1080
GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ  1140
TGPLRSEENN VMGQLDHKGV QTLKSLASDA LEAEDRPNLV LDDADCVRDA QKSRVFSADA  1200
LKDDVAEEGI LIAESEPVGG RINFDPTNPG MDGEKLMGEL SSDGNTDTSR CSLPGSVHDS  1260
NSSGNASALA GGGSCSGFSL NPECLHQVSV GLNSMQKPSV ISMPHENRHA PADSVSQDSA  1320
KIECEKAFNQ DRLSSTLDLQ EGREPKSVGI DECHQHLPGL PIYTNVESSQ VLKGYPLQMA  1380
TKKDTNGDVM SGNLSEVQNF SKPDRKINGH YMTKDGFLQF GNCKPQCSEV DFPLAPQKVE  1440
QPVGPPKAHS WSSSDSDKPS RNGDVKLFGK ILSNPSSLSK SSSNIHENEE KGAHNHKLSN  1500
TSSNLKFTGH HNADGNSSLL KFDCSSYLGI EKVPRRSYGF WEGNKVHSGY PSFSDSAILL  1560
AKYPAAFGNF PTTSSKMEQQ PLQAVVKNND RNINGVSVFP SREISGSNGV VDYPVFSRSR  1620
DGAKVPPFTV DVKQQQQRQD VFDMPRRNGF DTISSLQQQG RGIVGMNVVG RGGILVGGPC  1680
TGVSDPVAAI RMHYAKTEQY GGQPGSMIRE EESWRGGKGD VGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein