PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g417690.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 412aa MW: 47190.6 Da PI: 9.8039

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g417690.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	94.1	9.7e-30	98	186	1	85
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kv tpsdv+k++rlv+pk++ae++ + ++ l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ Pd.00g417690.m01 98 FDKVVTPSDVGKLNRLVIPKQHAERYfpldstA--NDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERG 186 89***********************999643..346779**********************************************53 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MKKGRFGHLQ AVGKFSSSSH NYNNSNYGSS PKYKATFVPP PLPHHHQYQQ QKPWAVHNHG 60 SPEAINFMDL SLNHEQAAAD GANNNNNWPP NSEREHMFDK VVTPSDVGKL NRLVIPKQHA 120 ERYFPLDSTA NDKGLLLNFQ DRTGKPWRFR YSYWNSSQSY VMTKGWSRFV KEKKLDAGDI 180 VSFERGVGDS AAAAQLVTPF TGKAQKAQRC KKGNCKAVAD EYIECEPIII LIDLILHKTK 240 AYTHLLYNVI DPQAPSFQGL LWKSTFGFLL LDAYRSLFLE RSKEEWGLSM SFASLLWRFQ 300 KMLMDVVFGN IMFLSTFLLS MRVLFSTFPR PLRYKDLLLA IFISSYFKMF LIAMMVWECP 360 SVIFIIDLFV LSSNTVALKV ITQSAMSRCI AACFSAHVVK FLVTQRCWSW EL

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MKKGRFGHLQ AVGKFSSSSH NYNNSNYGSS PKYKATFVPP PLPHHHQYQQ QKPWAVHNHG  60
SPEAINFMDL SLNHEQAAAD GANNNNNWPP NSEREHMFDK VVTPSDVGKL NRLVIPKQHA  120
ERYFPLDSTA NDKGLLLNFQ DRTGKPWRFR YSYWNSSQSY VMTKGWSRFV KEKKLDAGDI  180
VSFERGVGDS AAAAQLVTPF TGKAQKAQRC KKGNCKAVAD EYIECEPIII LIDLILHKTK  240
AYTHLLYNVI DPQAPSFQGL LWKSTFGFLL LDAYRSLFLE RSKEEWGLSM SFASLLWRFQ  300
KMLMDVVFGN IMFLSTFLLS MRVLFSTFPR PLRYKDLLLA IFISSYFKMF LIAMMVWECP  360
SVIFIIDLFV LSSNTVALKV ITQSAMSRCI AACFSAHVVK FLVTQRCWSW EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01030.1	2e-59	B3 family protein