PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g417660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 347aa    MW: 37878.2 Da    PI: 9.2707
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g417660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.29.6e-3463119358
       ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                       +v YkeClkNhAaslGgha+DGCgEfmps++++  ++++lkCaACgCHRnFHRr+++
  Pd.00g417660.m01  63 AVAYKECLKNHAASLGGHALDGCGEFMPSPSSNpMDPTSLKCAACGCHRNFHRRDQH 119
                       799******************************9********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDFTSANHLT PTATTIKTPD TDTEPPSPSE PKSISNRSLS FPNGSLKPHH PTIPPPQPPP  60
TTAVAYKECL KNHAASLGGH ALDGCGEFMP SPSSNPMDPT SLKCAACGCH RNFHRRDQHR  120
PKNVLSHHRL LLPAPPTHHH HHSSSPSPTQ SPVSSQGPTL SPQSPPPVSH LPPSYFASPP  180
QMLLALSNGV SGPSDGHHHG LHPTTMKAEK YTNEKKRSRT KFSQEQKEKM NLFAEKVGWR  240
MQRSDERLVE EFCNEVGVRR GVFKVWMHNN KHGLKKRSER SSDGGEQMII SNVKYETSNG  300
DDEGCGRVGF DSIVNAQTTS YNVNAIPQNG GTRPSFHLSN TGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.11e-59ZF-HD family protein