PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g414340.m04

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 1066aa MW: 121279 Da PI: 5.8988

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g414340.m04	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.9	8.5e-19	5	77	55	127
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +fFs+ +y+++++++r+t+ g+Wk+tg+++e+ ++ +++++g k++L+fy g+ +++ ktdWvmhey Pd.00g414340.m04 5 DENGFFFSQP--EYTQKNNTKRSTEVGFWKKTGREHEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 77 4566888876..4667789******************99767778*************************7 PP
2	NAM	31.9	3.7e-10	320	396	33	115
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapk 115 i++ i k P+ ++ +k+++++w+fF k +k +ratk+g+Wk t kd+ ++++ +++++ k++L+fy gr ++ Pd.00g414340.m04 320 SITKSSIDKKVPQGNKSLIKSDDENWFFFYKYKK-------GSRATKEGFWKITSKDRVIKARdNRTVIAKKRILTFYIGRVHE 396 377777788888877777889999**998644.......579999**********9955666888999**998766 PP
3	NAM	28	6.3e-09	672	713	12	54
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ Pd.00g414340.m04 672 EELVDHYLKNKRQDRDFHV-DHIPEIDICKYDPWEIPGLFTEQ 713 9****************.89************9544333 PP

Sequence ? help Back to Top
Protein Sequence Length: 1066 aa Download sequence
MKPDDENGFF FSQPEYTQKN NTKRSTEVGF WKKTGREHEI RTRDRRRTVI GKKRILTFYI 60 GHGRNSDKTD WVMHEYYIPK AHPNANQRDF VLCHCHLKKN VKNSDEIHTD VATTCDEGEP 120 STAFDVENQP KHGMDIQEED TQQPENLDYF EQTKDRWLAS SCSNNDHNAT FADNDSESEL 180 EERLRPFNTK PFHAGELSLE MLYELQHGLS QSIQDTDIML HNQLSRQAAS SVNVALKPQT 240 DRVQLETGIA LGGYGIRLRS DRIALRDTSA DEYYTREKTR RITYPPEKAK EPEKPKPAPE 300 KPKAPAYHRT AADLAEKQIS ITKSSIDKKV PQGNKSLIKS DDENWFFFYK YKKGSRATKE 360 GFWKITSKDR VIKARDNRTV IAKKRILTFY IGRVHENTDV ATTCDEGETS THNASDFENQ 420 PVHGMEDTRP RENLDYFERT RDLWLANSFS NNDHDAFQSD FEANDPEAEA FVRSVLNDPQ 480 CDTDTEPIHV SLQGRRFTSS PSTRDTEVIL HNQLSRPAAS PVHVAPQPQT SELQLQSGTS 540 ERTHRPQPKS INVLRRTSAV NVDAFNVSIN CIRLATDDEY YTKERARRRT YPPVGKLREI 600 KLQQSKAKEP EERRTSVDLP EKQISITKSS IDRKDGWNIA DSKLVLEMQK TDHRWIKIQD 660 ENQPIPMESG KEELVDHYLK NKRQDRDFHV DHIPEIDICK YDPWEIPGLF TEQDSPYHAS 720 PDPQLAERDF VLYRMKQNPD KKDTSVFAEG EPSSYNWSNC EDQAADDVTP ESQDHSPSTL 780 QSPAYIELGD VLQVNDFNED CNDMQSPFGD YDYSVTHKNY FSTCDEVAYD MSQEQAQYYH 840 SFTLPSPIYS ELGSVPHDDV YNNEWQSAYA NFENQTTDER ISEVAQEASL VLLTTSSAGG 900 SATTHPATQQ PPPPPVQPTQ PYPTSLPRQP PPPSLQGHGH DPPSNHHHHK SNQPNLTQHH 960 YPGNHHHHHS NLTQYHSPSN QPLPPPHHAT SQDTPTSLLV PLSSPKPSPD IHSHLPILPR 1020 PPPSPATFLC NHQEVSSGGG VCGLLSVFVV VGAEILDVFE GGEGVG

Sequence ? help Back to Top

Protein Sequence Length: 1066 aa Download sequence

MKPDDENGFF FSQPEYTQKN NTKRSTEVGF WKKTGREHEI RTRDRRRTVI GKKRILTFYI  60
GHGRNSDKTD WVMHEYYIPK AHPNANQRDF VLCHCHLKKN VKNSDEIHTD VATTCDEGEP  120
STAFDVENQP KHGMDIQEED TQQPENLDYF EQTKDRWLAS SCSNNDHNAT FADNDSESEL  180
EERLRPFNTK PFHAGELSLE MLYELQHGLS QSIQDTDIML HNQLSRQAAS SVNVALKPQT  240
DRVQLETGIA LGGYGIRLRS DRIALRDTSA DEYYTREKTR RITYPPEKAK EPEKPKPAPE  300
KPKAPAYHRT AADLAEKQIS ITKSSIDKKV PQGNKSLIKS DDENWFFFYK YKKGSRATKE  360
GFWKITSKDR VIKARDNRTV IAKKRILTFY IGRVHENTDV ATTCDEGETS THNASDFENQ  420
PVHGMEDTRP RENLDYFERT RDLWLANSFS NNDHDAFQSD FEANDPEAEA FVRSVLNDPQ  480
CDTDTEPIHV SLQGRRFTSS PSTRDTEVIL HNQLSRPAAS PVHVAPQPQT SELQLQSGTS  540
ERTHRPQPKS INVLRRTSAV NVDAFNVSIN CIRLATDDEY YTKERARRRT YPPVGKLREI  600
KLQQSKAKEP EERRTSVDLP EKQISITKSS IDRKDGWNIA DSKLVLEMQK TDHRWIKIQD  660
ENQPIPMESG KEELVDHYLK NKRQDRDFHV DHIPEIDICK YDPWEIPGLF TEQDSPYHAS  720
PDPQLAERDF VLYRMKQNPD KKDTSVFAEG EPSSYNWSNC EDQAADDVTP ESQDHSPSTL  780
QSPAYIELGD VLQVNDFNED CNDMQSPFGD YDYSVTHKNY FSTCDEVAYD MSQEQAQYYH  840
SFTLPSPIYS ELGSVPHDDV YNNEWQSAYA NFENQTTDER ISEVAQEASL VLLTTSSAGG  900
SATTHPATQQ PPPPPVQPTQ PYPTSLPRQP PPPSLQGHGH DPPSNHHHHK SNQPNLTQHH  960
YPGNHHHHHS NLTQYHSPSN QPLPPPHHAT SQDTPTSLLV PLSSPKPSPD IHSHLPILPR  1020
PPPSPATFLC NHQEVSSGGG VCGLLSVFVV VGAEILDVFE GGEGVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01540.1	2e-13	NAC family protein