PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g412020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 484aa MW: 54368 Da PI: 8.0232 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.8e-11 | 309 | 355 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g412020.m01 309 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 355 799***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence |
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FQVNSDLASK RNNKVTNNHQ PKFGFNKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN RVSQQKGGRE GNVLAPLLEN 240 GIFSGSQKKL TRQAAGTKEA ARFNIGGSSP ESLSGSVGNF TCENTENTRS KKRRRSSNNG 300 ASRESSLLNH VEAERQRREK LNHRFYLLRS VVPNVSKMDR SSLLADAVAY INQLKAKVEE 360 LELKTQAQPQ NPKRVSVNNL DNQCSQSTSS IVDHHSSYNN TKVVPVEVDV KIMGSEAIIR 420 VQCPDQDYPY ARLMNALKGL GLQVYHASIS SVKELMIQDV VARVPYGFTS EEAMRIGIIK 480 RWHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 5e-58 | bHLH family protein |