PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g409990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 336aa MW: 37018.5 Da PI: 9.0312

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g409990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.8	4e-23	76	120	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++rgr rsrk +e+ Pd.00g409990.m01 76 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMNRGRYRSRKLVES 120 79***************************************9986 PP
2	QLQ	52.2	1.8e-18	14	48	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQ++++++Q+l++KyL a++PvPp+Ll +i+ Pd.00g409990.m01 14 PFTVAQWAEMEHQALIFKYLKAGLPVPPDLLSPIR 48 9********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MSGSSVGNGG LAPPFTVAQW AEMEHQALIF KYLKAGLPVP PDLLSPIRTS FNLISSNFLR 60 HHPTLGYTSY CGKKIDPEPG RCRRTDGKKW RCSKDAHPDS KYCERHMNRG RYRSRKLVES 120 QTTSQSSSTV TSDSVIGSSS HSGSFQNMPL HSMVNSGGLC FGSNVSQLKM EPIPYGIGNS 180 GNRGRSGAEE HNFMSEPSGS VRCLGMDSTV DSPWHLMVPR VSLKSEPKNC SLLLNNSSQL 240 QTLQHTEPLT VDTAITKQQQ HQYVGGQFGF PGALKHEQNS LQPFFDEWPK SRDLGFHLSD 300 HRSTNTLTAT QLSMSNTMAP TKFFARSADS PTDAYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-41	GRF family protein