PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g409750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 701aa MW: 78879.1 Da PI: 6.9738

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g409750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.1	8.1e-33	451	505	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Pd.00g409750.m01 451 KPRLRWTPDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 505 79****************************************************8 PP
2	Myb_DNA-binding	66.8	4e-21	453	504	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Pd.00g409750.m01 453 RLRWTPDLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 504 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MMATRFILSR ARTSTKNLNL HGSSPLSQFI RNLSSVVSRE SNFRNLKNPR PGYSRSMVSA 60 SNYNLDQDTA LSLDTRVPAT VITGFLGSGK TTLLNHILTS QHGKRIAVIE NEFGEVDIDG 120 SLVASHSSVS EDIVMVNNGC LCCTVRGDLV KMLLELVKKK RDKFDHIVIE TTGLANPAPV 180 IETFCMDELV SRHVKLDGVV TLVDAKHAMQ HLNEVKPRFV VNEAVEQVAY ADRIILNKID 240 LVTETELEVL TNRIKHINGM AQIKLAKFGS VDMDFVLGVG GYDLERIDSQ VQVDKHHNHH 300 HDHVHDSTVS SVSIVYEGTL DLDEVDDWLE RLIEEKGEDL YRMKGVLSIN GSDQRYVFQG 360 VHSTLDGCPG MAKCGRDHNE FNASYYHRGV WAWRLMNHSG FILQMLKYHF YYTGFGEACI 420 CLLMERNYGG VCDGEGNCGY ENGVMMTRDP KPRLRWTPDL HDRFVDAVTK LGGPDKATPK 480 SVLRLMGLKG LTLYHLKSHL QKYRLGQHAR KQNSGEEHNR ENNRDSYVHF SNHHSTGSSA 540 KSSRGGNAEQ GTLPFSEALK CQIEVQNRLQ EQLEVQKKLQ MRIEAQGKYL QAILEKAQKG 600 LSLDMKGPTT VEATRAQLTD FNLALSNFME NINEEDRRGK SNGSTFEIYE EGNTEENKDA 660 KLKVERGSIN FDLNTKGSYD YVGSNAGDFE PRCFRLRDTT L

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MMATRFILSR ARTSTKNLNL HGSSPLSQFI RNLSSVVSRE SNFRNLKNPR PGYSRSMVSA  60
SNYNLDQDTA LSLDTRVPAT VITGFLGSGK TTLLNHILTS QHGKRIAVIE NEFGEVDIDG  120
SLVASHSSVS EDIVMVNNGC LCCTVRGDLV KMLLELVKKK RDKFDHIVIE TTGLANPAPV  180
IETFCMDELV SRHVKLDGVV TLVDAKHAMQ HLNEVKPRFV VNEAVEQVAY ADRIILNKID  240
LVTETELEVL TNRIKHINGM AQIKLAKFGS VDMDFVLGVG GYDLERIDSQ VQVDKHHNHH  300
HDHVHDSTVS SVSIVYEGTL DLDEVDDWLE RLIEEKGEDL YRMKGVLSIN GSDQRYVFQG  360
VHSTLDGCPG MAKCGRDHNE FNASYYHRGV WAWRLMNHSG FILQMLKYHF YYTGFGEACI  420
CLLMERNYGG VCDGEGNCGY ENGVMMTRDP KPRLRWTPDL HDRFVDAVTK LGGPDKATPK  480
SVLRLMGLKG LTLYHLKSHL QKYRLGQHAR KQNSGEEHNR ENNRDSYVHF SNHHSTGSSA  540
KSSRGGNAEQ GTLPFSEALK CQIEVQNRLQ EQLEVQKKLQ MRIEAQGKYL QAILEKAQKG  600
LSLDMKGPTT VEATRAQLTD FNLALSNFME NINEEDRRGK SNGSTFEIYE EGNTEENKDA  660
KLKVERGSIN FDLNTKGSYD YVGSNAGDFE PRCFRLRDTT L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	9e-69	G2-like family protein