PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g405720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 622aa MW: 67875.2 Da PI: 8.8439

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g405720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.9	1.1e-17	411	460	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aa+a+++a+ l+g Pd.00g405720.m01 411 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 460 59**999.******954...5*******************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MAGSVRVKEA VVVAPSEPTP TCVLNLSAID SQLFLRFTIE YLLVYAPRPV LNQEATTTRV 60 KSALAKALVP YYPLAGRVRP KADGSSLEVV CRAQGAVFIE AVSDRATLSD FERAPRYVAQ 120 WRKLLSLQVA DVLKGAPPLV VQLTWLKDGA AALGVGFNHC LCDGIGSAEF LNSFAELAAG 180 KPGFANEFKP NPVWDRHLLD PQPVNHVMPR HRIPNAASHP EFNKVPDRCG FMNRFSNERL 240 IPTSITFENI YLRELKKLAL STSRLSTESA YTSFEVLSAH VWRSWARALN LASNQILKLL 300 FSVNVRNRVK PSLPGGYYGN AFVLGCAQSS VKDLEEKGLG HAAGLVKLAK ERVGEEHVRR 360 VVESVSESKA SPDTVGVLIV SQWSRLGLER VDFGMGRPVH GKGGPDNNKF RYRGVRQRSW 420 GKWVAEIREP RKRTRKWLGT FATAEDAARA YDRAAIILYG SRAQLNLQPS GFGLTLPFPS 480 PAHPVPLMAS GFVPYGVGVG VYPSVAAAAT SSYPVSDGGG GDTSTSYQNP NPSHDQYQEL 540 LHHNQNNQAD SCSFDDGNSI MGSRLSLSSS QPMPVAPGCS DPMSGVGPMS PLMWPLTSEE 600 ECAPSLWDYG DPFFLDFKGF DS

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MAGSVRVKEA VVVAPSEPTP TCVLNLSAID SQLFLRFTIE YLLVYAPRPV LNQEATTTRV  60
KSALAKALVP YYPLAGRVRP KADGSSLEVV CRAQGAVFIE AVSDRATLSD FERAPRYVAQ  120
WRKLLSLQVA DVLKGAPPLV VQLTWLKDGA AALGVGFNHC LCDGIGSAEF LNSFAELAAG  180
KPGFANEFKP NPVWDRHLLD PQPVNHVMPR HRIPNAASHP EFNKVPDRCG FMNRFSNERL  240
IPTSITFENI YLRELKKLAL STSRLSTESA YTSFEVLSAH VWRSWARALN LASNQILKLL  300
FSVNVRNRVK PSLPGGYYGN AFVLGCAQSS VKDLEEKGLG HAAGLVKLAK ERVGEEHVRR  360
VVESVSESKA SPDTVGVLIV SQWSRLGLER VDFGMGRPVH GKGGPDNNKF RYRGVRQRSW  420
GKWVAEIREP RKRTRKWLGT FATAEDAARA YDRAAIILYG SRAQLNLQPS GFGLTLPFPS  480
PAHPVPLMAS GFVPYGVGVG VYPSVAAAAT SSYPVSDGGG GDTSTSYQNP NPSHDQYQEL  540
LHHNQNNQAD SCSFDDGNSI MGSRLSLSSS QPMPVAPGCS DPMSGVGPMS PLMWPLTSEE  600
ECAPSLWDYG DPFFLDFKGF DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40220.1	1e-27	ERF family protein