PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g400120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 784aa MW: 86029.5 Da PI: 6.7512

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g400120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.5e-15	511	549	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e Pd.00g400120.m01 511 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 549 89**********************************975 PP
2	TCR	52.2	1.2e-16	597	635	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+ Pd.00g400120.m01 597 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 635 589***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP 60 VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY 120 LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAIVLSDQA 180 EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN CGENAAKVNR 240 AGCQYDEKNA SSQSREDSNE RKQRVQKGLV KEGGQNERGI RRHLQFEAAK AYKFTILGNS 300 ESPNSLTHDG TNSRSPSILT NLKSLASSHF DNRASSSLQD VSCDTSQFPS SPYESFTSAQ 360 IGVNSTTSAP IHSGIGLHLN RISRSTSLSS DIFSSKKSTG YLSTPEQMLE YGSNNIATNS 420 SSILTSAVSG KIYVYVASSQ QESQAVTEAN SFTFHSTDTM KPPCHSMLVD QEAAPCEVGM 480 SASQETDEVE ELNQLSPKRK RRRDAYMSEG CKRCNCRRSK CLKLYCECFA AGVYCVDSCA 540 CVNCYNKPEF EDTVLDIRQQ IEARNPLAFT PKVVDNAIDS SPNFTEEQDL TTPSSARHKR 600 GCNCKKSKCL KRYCECFQAK VGCSSACRCE GCKNTFGVTP EPVYNRAKRW EAHPAEKLDN 660 VKGAIACIKA PAFSSASSSN SAKIPQAQLS SSQLQPSGAH YDIPHDDTPE ILEETSNPTK 720 FVKASSPNQK HVSPPQSRSR LRERSPTGLR SGRKFILQAM PSFPPLTPHR NSNEGTNEIE 780 NDDK

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY  120
LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAIVLSDQA  180
EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN CGENAAKVNR  240
AGCQYDEKNA SSQSREDSNE RKQRVQKGLV KEGGQNERGI RRHLQFEAAK AYKFTILGNS  300
ESPNSLTHDG TNSRSPSILT NLKSLASSHF DNRASSSLQD VSCDTSQFPS SPYESFTSAQ  360
IGVNSTTSAP IHSGIGLHLN RISRSTSLSS DIFSSKKSTG YLSTPEQMLE YGSNNIATNS  420
SSILTSAVSG KIYVYVASSQ QESQAVTEAN SFTFHSTDTM KPPCHSMLVD QEAAPCEVGM  480
SASQETDEVE ELNQLSPKRK RRRDAYMSEG CKRCNCRRSK CLKLYCECFA AGVYCVDSCA  540
CVNCYNKPEF EDTVLDIRQQ IEARNPLAFT PKVVDNAIDS SPNFTEEQDL TTPSSARHKR  600
GCNCKKSKCL KRYCECFQAK VGCSSACRCE GCKNTFGVTP EPVYNRAKRW EAHPAEKLDN  660
VKGAIACIKA PAFSSASSSN SAKIPQAQLS SSQLQPSGAH YDIPHDDTPE ILEETSNPTK  720
FVKASSPNQK HVSPPQSRSR LRERSPTGLR SGRKFILQAM PSFPPLTPHR NSNEGTNEIE  780
NDDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	498	503	KRKRRR
2	499	503	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-60	CPP family protein