PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g397470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 858aa MW: 97564.9 Da PI: 6.9667

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g397470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.4	2.4e-23	115	200	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YneY+ ++GFs+r++++++ + + + + +fvCskeg+re+++ +++ r etrtgCka+++ ++e g+w+v++++ +HnH+la Pd.00g397470.m01 115 LYNEYGARIGFSIRRKQKRYD-KYEVVRQLNFVCSKEGFREDSDPC-KEKAIDRLETRTGCKARIRFSLE-GGVWKVSTFNPDHNHKLA 200 7*************99998.6667************9988.89999**************.**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
MHAQSLLSMP YSIADSVTKY RSCYHSSTVS LICNFKNRRT GLQRPGTFFI VSNPLFWLAK 60 RGCFGLFNVI DLGSDEENTK SNDQEKNPTF GNLEESSDEN LYRKIVYNEQ EAYDLYNEYG 120 ARIGFSIRRK QKRYDKYEVV RQLNFVCSKE GFREDSDPCK EKAIDRLETR TGCKARIRFS 180 LEGGVWKVST FNPDHNHKLA RPDERQFLRS NRKISESHKG VIKTMVSAAT ARRIFEEVKC 240 ISDINKQRAS RSERSSALSS RAAWKSLRAP NIAYREMDGN TSGEDGNDID WSTEDELEIE 300 SFTLSSSSSQ TVPGREAIVG SGEASSSQGP SNSKVVDHFV GMGFSGKMVA KAIQEHGEEN 360 TDSILETLLT YSALESSPRE QQQVDCDDQF SSDSKASFLD DFSDIDSYSD NEDILNPTSE 420 KNKKLLSLVN MGYTVEEASI AIERCGLDST VVELTDFICA AQMARAEDAH LPLEEKPRLN 480 HAYKKRKLLE YELLKKKKHM RLGNKTIDED DEAVHLPNPM VGFGIPSEPC LKTHRNLPET 540 ALGPPYFYYE NVALTPKGVW STISRFLYDV QPEFVDSKYF CAAARKRGYV HNLPIENRFP 600 LIPLPPHTIH EAFPLIRKWW PSWDTRTKLN CLLTSIASAK STERIRKALE DYDGEPPLRV 660 QKYVLDECRK WNLVWVGRNK VAPLEPDEVE MLLGFPKNHT RGISRTDRYK SLGNSFQIDT 720 VAYHLSVLKD MFPNGINLLS LFSGIGGAEI ALHRLGIRLK NVVSVEISAV NRNVVRSWWE 780 QTNQRGNLYD LDDVQQLNGD RLEHYMTLFG GFDLVVGGSP CNNLTGSNRL HRDGLEGKES 840 SLFYHYYRIL DLVRSIKT

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

MHAQSLLSMP YSIADSVTKY RSCYHSSTVS LICNFKNRRT GLQRPGTFFI VSNPLFWLAK  60
RGCFGLFNVI DLGSDEENTK SNDQEKNPTF GNLEESSDEN LYRKIVYNEQ EAYDLYNEYG  120
ARIGFSIRRK QKRYDKYEVV RQLNFVCSKE GFREDSDPCK EKAIDRLETR TGCKARIRFS  180
LEGGVWKVST FNPDHNHKLA RPDERQFLRS NRKISESHKG VIKTMVSAAT ARRIFEEVKC  240
ISDINKQRAS RSERSSALSS RAAWKSLRAP NIAYREMDGN TSGEDGNDID WSTEDELEIE  300
SFTLSSSSSQ TVPGREAIVG SGEASSSQGP SNSKVVDHFV GMGFSGKMVA KAIQEHGEEN  360
TDSILETLLT YSALESSPRE QQQVDCDDQF SSDSKASFLD DFSDIDSYSD NEDILNPTSE  420
KNKKLLSLVN MGYTVEEASI AIERCGLDST VVELTDFICA AQMARAEDAH LPLEEKPRLN  480
HAYKKRKLLE YELLKKKKHM RLGNKTIDED DEAVHLPNPM VGFGIPSEPC LKTHRNLPET  540
ALGPPYFYYE NVALTPKGVW STISRFLYDV QPEFVDSKYF CAAARKRGYV HNLPIENRFP  600
LIPLPPHTIH EAFPLIRKWW PSWDTRTKLN CLLTSIASAK STERIRKALE DYDGEPPLRV  660
QKYVLDECRK WNLVWVGRNK VAPLEPDEVE MLLGFPKNHT RGISRTDRYK SLGNSFQIDT  720
VAYHLSVLKD MFPNGINLLS LFSGIGGAEI ALHRLGIRLK NVVSVEISAV NRNVVRSWWE  780
QTNQRGNLYD LDDVQQLNGD RLEHYMTLFG GFDLVVGGSP CNNLTGSNRL HRDGLEGKES  840
SLFYHYYRIL DLVRSIKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	498	KKRKLLEYELLKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-16	FAR1 family protein