PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g388790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 434aa    MW: 48751.5 Da    PI: 6.9527
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g388790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS283.37.2e-87233591345
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ Ll  A+av++++ + a + L++l + +s  gd++qR++ayf+ +Laarl+   s  ++ +  ++ts    +ee+ a++ ++ vsP+++f
  Pd.00g388790.m01  23 LIHMLLITATAVNENNVSSALENLSELFKSVSLCGDSVQRVVAYFADGLAARLLTRKSPFFDMIMKEPTS----EEEFVAFTSLYRVSPYYQF 111
                       6899***************************************************999999888777775....78889999*********** PP

              GRAS  94 shltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfef 178
                       +h+taNqaI ea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    s +el+et++rL +f + + ++ fef
  Pd.00g388790.m01 112 AHFTANQAIIEAFEKEeeknnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGQ----SLDELRETENRLMSFSKGFrNLIFEF 200
                       **************9977777788**********************99755566*********....9****************97579**** PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       + l    l   +l +Lr k++E++aVnlv++l +l  +s+++++     Lk v  l+P +v++veqe +++  +Fl rf+e+l+y++a+fdsl
  Pd.00g388790.m01 201 QGL----LRGSKLINLRKKRNETIAVNLVFHLNTLS-NSLKISD----SLKSVHLLNPSIVILVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 284
                       **8....66667789*****************9997.6666666....9******************************************** PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                       +  lp es er ++E+  lg+ei++++   +++    + e++e+W++r+e+ GF+ ++ls+k   qa+lll+   
  Pd.00g388790.m01 285 DDCLPLESAERLSIEKNHLGKEIKSMLNYDNDDvNCSKIEKMETWKARMESHGFEGINLSSKSKIQARLLLKIRT 359
                       *****************************9999788999*******************************97433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MLKLDHKKKG AHVLDEDGKG LHLIHMLLIT ATAVNENNVS SALENLSELF KSVSLCGDSV  60
QRVVAYFADG LAARLLTRKS PFFDMIMKEP TSEEEFVAFT SLYRVSPYYQ FAHFTANQAI  120
IEAFEKEEEK NNRALHVIDF DVSYGFQWPS LIQSLSEKAT SGNRISLRIT GFGQSLDELR  180
ETENRLMSFS KGFRNLIFEF QGLLRGSKLI NLRKKRNETI AVNLVFHLNT LSNSLKISDS  240
LKSVHLLNPS IVILVEQEGS RSPRNFLSRF MESLHYFAAM FDSLDDCLPL ESAERLSIEK  300
NHLGKEIKSM LNYDNDDVNC SKIEKMETWK ARMESHGFEG INLSSKSKIQ ARLLLKIRTH  360
YCPLQFDGES SGGSTAGFKV FERDDGRTIS LGWQDRKAME AGDEAAASTV PSQGEKIDIS  420
KDVSAVKKGG CCSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-49GRAS family protein