PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g387700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 392aa MW: 44406.9 Da PI: 4.0134

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g387700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.1	2.5e-17	7	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 p GfrF+P+dee+v +L + + ++k ++l + ++ +++ +++eP+++ kk+ + ++++yf sk +k ++ ++ +r+ + g+W++t Pd.00g387700.m01 7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSET 98 89****************97776658555444489999733589*8544433224557777777766554.5566668999** PP NAM 87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k v++k + + +g k+ + + + + + +t W+++ey+l Pd.00g387700.m01 99 ESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143 **999877666667****984..334469******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK 60 YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKQ 180 SSCQQGCSSS PIGGDLVGFD PIDLTIFEGN TMADMEQLLG EDWSPSNFEN EENTMASSME 240 QLLGEAWSPS NFEDAVSYDD VDPIGETQIN FENEENTMAN MEQLLGEAWS PSNFENEENT 300 MASMEQLLGE AWSSSNFEDA VSYDVDPIGK TQINFENEEN TMANMEQLLG EAWSPSNFEN 360 VVSHDVDPIG ETQSSQLSNW SQAMLDQLLV GV

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKQ  180
SSCQQGCSSS PIGGDLVGFD PIDLTIFEGN TMADMEQLLG EDWSPSNFEN EENTMASSME  240
QLLGEAWSPS NFEDAVSYDD VDPIGETQIN FENEENTMAN MEQLLGEAWS PSNFENEENT  300
MASMEQLLGE AWSSSNFEDA VSYDVDPIGK TQINFENEEN TMANMEQLLG EAWSPSNFEN  360
VVSHDVDPIG ETQSSQLSNW SQAMLDQLLV GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56530.1	3e-09	NAC family protein