PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g387480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 26720.7 Da PI: 10.2361 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.7 | 1.7e-17 | 7 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 p GfrF+P+dee+v +L + + ++k ++l + ++ +++ +++eP+++ kk+ + ++++yf sk +k ++ ++ +r+ + g+W++t Pd.00g387480.m01 7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSET 98 89******************97776658555444489999733589*****8544433224557777777766554.5566668999****** PP NAM 87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k v++k + + +g k+ + + + + + +t W+++ey+l Pd.00g387480.m01 99 ESSKLVHEKvsgnpNPNPIGGKRKFRYEN--KGSEDHTGWLLDEYSL 143 ******999877666667********984..334469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEVSLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK 60 YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGGK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIRATNLKR 180 GSQDKEKKKM TTNKKMKKMI KWDQQNHHLN KAALPVQLVV ISWALIRLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56530.1 | 2e-09 | NAC family protein |