PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g386550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 596aa    MW: 66981.1 Da    PI: 4.7379
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g386550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS279.31.2e-852235941374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsely.kalppsetsekn.sseelaalkl.fsevsPi 90 
                       lve Ll+ Ae v  ++ e+a +lL+r   l+s++g++++R++ yf eAL++++ r++ +++ k l  +++ + +   ++ + ++l  +   P+
  Pd.00g386550.m01 223 LVEFLLASAEKVGYQQYERAGKLLNRCDLLSSSTGNSVERVVYYFSEALREKIDRETGRVApKGLGNKPSFDVDmAMKRPNETSLaCQIKIPF 315
                       57889**************************************************666655144444443333333344444444356668** PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                        ++++++  qaI+e v+++++vH+iD++i +G+QW  L+qaLasR++ p   l+i ++g    +s++ +eetg+rL++fAe++++pf+f++++
  Pd.00g386550.m01 316 GQVAQFAGIQAIVENVAEAKKVHVIDLEIRNGVQWTGLMQALASRSDCPVeLLKISAIGT---SSRKLIEETGKRLESFAESMNLPFSFKLVM 405
                       **********************************************6655499*******...579999**********************99 PP

              GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       + ++ dl+ ++++++++E++aV + +++ +++ ++  les     ++++k+++P v vv+e e +hns+ F++rf+eal ++ a fd++e+ +
  Pd.00g386550.m01 406 VPDMLDLKEDMFELDSEETVAVYSEFAMRSMVPQPDRLES----AMRVIKNIRPCVTVVTEVEGNHNSPVFVTRFIEALFFFGAYFDCVETCM 494
                       99*****************************977777777....************************************************* PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpL 367
                        r++ +r+ +E +++g+ ++n+va+eg+er+ r+ +   Wr+ + + G++++ ls +   q++l+l++++ +   +v+ + ++l+ gWk+ pL
  Pd.00g386550.m01 495 ERNDPNRMILESQYFGNGLRNIVAAEGEERKIRNVKIDVWRAFFARYGMEEIDLSPSSLYQVDLVLKNFScGSSCTVNMDGKCLLVGWKGTPL 587
                       **********************************************************************9999******************* PP

              GRAS 368 vsvSaWr 374
                        s+S W+
  Pd.00g386550.m01 588 QSLSLWK 594
                       ******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    
MTNAMFSFEE FNFGGVQDKL SSTDKGSDTI MEEVKKIGKQ VHSYEADNWG DSRGFGSLGS  60
DYGFYGNNHY SSELLFPKFQ QQEEQQPLVS DYGLFDAMQF DALSPPFQAC LEEIAKLEDI  120
PTLVPHVEPK KEKRDFSSIA GLDLLNNYGS GFKRLNGERI FESSNYTDQV AGRKLSTEEI  180
MRVAGARFIR TSSQASGVAS MLSHPYEFSF SGLSVEETRD VELVEFLLAS AEKVGYQQYE  240
RAGKLLNRCD LLSSSTGNSV ERVVYYFSEA LREKIDRETG RVAPKGLGNK PSFDVDMAMK  300
RPNETSLACQ IKIPFGQVAQ FAGIQAIVEN VAEAKKVHVI DLEIRNGVQW TGLMQALASR  360
SDCPVELLKI SAIGTSSRKL IEETGKRLES FAESMNLPFS FKLVMVPDML DLKEDMFELD  420
SEETVAVYSE FAMRSMVPQP DRLESAMRVI KNIRPCVTVV TEVEGNHNSP VFVTRFIEAL  480
FFFGAYFDCV ETCMERNDPN RMILESQYFG NGLRNIVAAE GEERKIRNVK IDVWRAFFAR  540
YGMEEIDLSP SSLYQVDLVL KNFSCGSSCT VNMDGKCLLV GWKGTPLQSL SLWKFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.15e-58GRAS family protein