PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g385410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 29597.3 Da PI: 9.3515 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.8 | 6e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W+++ar g++R +k+c++rw +yl Pd.00g385410.m01 23 KGPWTAEEDGLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.8e-16 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ Pd.00g385410.m01 76 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MYLGMMAGHH MGWGIIEEEG WRKGPWTAEE DGLLIEYVKL HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPELKRGQIT PHEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKVPSD TSEKAKNRFL RKKQFHNQQH QQQQQHLQVN QEEVKRILAL LDENNDIKMP 180 CFWPQVKQGM ETISTYPHHT TDHQEQGFNY SMLNGNVSVP EASNNEDNFL WDGLWNLNDV 240 HGNFSSTCAA GKAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 9e-87 | MYB family protein |